The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695204

Identifier: 209695204

GI number: 209695204

Start: 1825069

End: 1825416

Strand: Direct

Name: 209695204

Synonym: VSAL_I1715

Alternate gene names: NA

Gene position: 1825069-1825416 (Clockwise)

Preceding gene: 209695203

Following gene: 209695206

Centisome position: 54.89

GC content: 35.92

Gene sequence:

>348_bases
ATGAATGTATTTACTGATATTTCCACCATTTATCTTCATCGTGATTTTGTCGATTTTCGCAAGGCCATTAATGGCCTTGT
CGTGATTGTTGAGCAAGAAATGCAACTATCACCGTTTAGTGATGCTCTATTTATATTTTGCAATAAGCCTCGTGATAAAC
TCAAAATATTGTATTGGGATAAAACAGGATTCGCTTTATGGTACAAGCGATTAGATGAAGACCGCTTCAAATGGCCACGA
AATATAAATAACGATACGTTAGCATTATCAGAGCAGCAACTGACACTGCTATTACAAGGTTTTGATATCTTAGGACATCA
ACCGGTACATTATCAAACAACCCTTTAA

Upstream 100 bases:

>100_bases
AATTACCAGATATTCAACTTTCTATCGGAAAATTGCGATTAACATTGCCAGCTAATACTGAACCTCACTGGATAGGACTC
TTATTAAAAGGGTATCAATC

Downstream 100 bases:

>100_bases
ATAGTTGATTCTCAGTCAAGAATAGGAGGCAACCGATTGATTACCTGTATTATCGTTATATAGTCATCTACATGACTGAT
AAAATAAAACCACTTCCTGA

Product: transposase

Products: NA

Alternate protein names: Transposase; IS66 Orf2 Like; Transposase ORF_A; Orphan Protein; Transposase Orf2 For Insertion Sequence Element; Transposase And Inactivated Derivatives; Transposase Family Protein; Tpn3 Protein; IS66 Family Element Orf2 Protein; Transposase-Like Protein; Transposase Truncated; IS66 Family Transposase; Transposase Protein

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MNVFTDISTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFIFCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPR
NINNDTLALSEQQLTLLLQGFDILGHQPVHYQTTL

Sequences:

>Translated_115_residues
MNVFTDISTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFIFCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPR
NINNDTLALSEQQLTLLLQGFDILGHQPVHYQTTL
>Mature_115_residues
MNVFTDISTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFIFCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPR
NINNDTLALSEQQLTLLLQGFDILGHQPVHYQTTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13682; Mature: 13682

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVFTDISTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFIFCNKPRDKLKILYWD
CCCCCCCEEEEEEHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEC
KTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDILGHQPVHYQTTL
CCCHHHHHHHCCCCCCCCCCCCCCCEEEECHHHEEEEEECCHHCCCCCEEEEECC
>Mature Secondary Structure
MNVFTDISTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFIFCNKPRDKLKILYWD
CCCCCCCEEEEEEHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEC
KTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDILGHQPVHYQTTL
CCCHHHHHHHCCCCCCCCCCCCCCCEEEECHHHEEEEEECCHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA