Click here to switch to the map view.

The map label for this gene is ybcY [H]

Identifier: 209695025

GI number: 209695025

Start: 1619937

End: 1620593

Strand: Direct

Name: ybcY [H]

Synonym: VSAL_I1517

Alternate gene names: 209695025

Gene position: 1619937-1620593 (Clockwise)

Preceding gene: 209695024

Following gene: 209695026

Centisome position: 48.72

GC content: 37.14

Gene sequence:

>657_bases
ATGAACAAAGATGCAGCGACAATTGCTGGACAAGCAGTGTATACAAAAAAAGTACTTTCCATCTATGATCTTTGGGTATT
AGGCTTTTCAAATCGTTACTTATGGAAGTGTTCAACAGCATTGATTGGAGAAAAATTTACTGAATTAGCATCGAAGAACC
ATTTAGATGTAGGGGTAGGGACAGGGTATTACTTAAAGAATCATCTCTCTAATGTTGAAAGAAGAGTGGCGCTGATCGAT
CTTAATGAGAACAGCCTTGAATCAACAGCGAATGCCATTCAACATTTTAACCCTGAAGTGTATCGTCGAAATGTATTAGA
GCCGTTGGATCTAAAATGTGAGAAGTTTGACTCTATTAGCATTAATTATCTGCTGCATTGCTTACCGGGTGAGCTATCAC
AAAAAGGCGTGGTATTTTCAAACCTGAATGAGCTGCTGAATAGTAATGGCGTATTGTTCGGTAGTACAATTTTAGGGCAA
GGCGTTACTAAAAATGCATTTGCGAGTAAATTAATGAATTTCTATAACCAGAAAGGCATTTTTACTAATGAGAACGATGA
CGTTCAGAGCTTAGAAATAGCATTAAAAGCGCATTTTTCTGATGTGAATATCGATGTGGTTGGTTGTGTCGCTCTGTTTT
CTGGTCGTAAAAAATAA

Upstream 100 bases:

>100_bases
TACCTATTCATACTGCAAATGCTTCTGGTAAGATTTGATTGCCTTCATTTTTAAGGTAGATTCGAGTTCCTTTTATAAGA
CAGTGTTACGGATATCTACA

Downstream 100 bases:

>100_bases
CAAAAATCCCTGTTTCAAGCATTCAGCATTGACTGTGCTGAATGTTTTTCTTTAAGCCTTTCGATTCCCCTTATGCTTAC
ATGCGTTTAAATCCATCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNKDAATIAGQAVYTKKVLSIYDLWVLGFSNRYLWKCSTALIGEKFTELASKNHLDVGVGTGYYLKNHLSNVERRVALID
LNENSLESTANAIQHFNPEVYRRNVLEPLDLKCEKFDSISINYLLHCLPGELSQKGVVFSNLNELLNSNGVLFGSTILGQ
GVTKNAFASKLMNFYNQKGIFTNENDDVQSLEIALKAHFSDVNIDVVGCVALFSGRKK

Sequences:

>Translated_218_residues
MNKDAATIAGQAVYTKKVLSIYDLWVLGFSNRYLWKCSTALIGEKFTELASKNHLDVGVGTGYYLKNHLSNVERRVALID
LNENSLESTANAIQHFNPEVYRRNVLEPLDLKCEKFDSISINYLLHCLPGELSQKGVVFSNLNELLNSNGVLFGSTILGQ
GVTKNAFASKLMNFYNQKGIFTNENDDVQSLEIALKAHFSDVNIDVVGCVALFSGRKK
>Mature_218_residues
MNKDAATIAGQAVYTKKVLSIYDLWVLGFSNRYLWKCSTALIGEKFTELASKNHLDVGVGTGYYLKNHLSNVERRVALID
LNENSLESTANAIQHFNPEVYRRNVLEPLDLKCEKFDSISINYLLHCLPGELSQKGVVFSNLNELLNSNGVLFGSTILGQ
GVTKNAFASKLMNFYNQKGIFTNENDDVQSLEIALKAHFSDVNIDVVGCVALFSGRKK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR016584 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 24259; Mature: 24259

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDAATIAGQAVYTKKVLSIYDLWVLGFSNRYLWKCSTALIGEKFTELASKNHLDVGVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEECC
TGYYLKNHLSNVERRVALIDLNENSLESTANAIQHFNPEVYRRNVLEPLDLKCEKFDSIS
CCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCC
INYLLHCLPGELSQKGVVFSNLNELLNSNGVLFGSTILGQGVTKNAFASKLMNFYNQKGI
HHHHEEECCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCCC
FTNENDDVQSLEIALKAHFSDVNIDVVGCVALFSGRKK
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKDAATIAGQAVYTKKVLSIYDLWVLGFSNRYLWKCSTALIGEKFTELASKNHLDVGVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEECC
TGYYLKNHLSNVERRVALIDLNENSLESTANAIQHFNPEVYRRNVLEPLDLKCEKFDSIS
CCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCC
INYLLHCLPGELSQKGVVFSNLNELLNSNGVLFGSTILGQGVTKNAFASKLMNFYNQKGI
HHHHEEECCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCCC
FTNENDDVQSLEIALKAHFSDVNIDVVGCVALFSGRKK
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]