Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209695026
Identifier: 209695026
GI number: 209695026
Start: 1620854
End: 1620979
Strand: Direct
Name: 209695026
Synonym: VSAL_I1518
Alternate gene names: NA
Gene position: 1620854-1620979 (Clockwise)
Preceding gene: 209695025
Following gene: 209695027
Centisome position: 48.75
GC content: 34.13
Gene sequence:
>126_bases ATGGGGACAGTAATAGGATTAGTACTGCTTGCATTTATTGCTTATAAGGTAAAAAAGCAAACGGGTTTGCATTTGCATAA GTGGATAGAAAAGAAATATCAAGAGCATGAAGACTCAAAAAAGTGA
Upstream 100 bases:
>100_bases AGTCTCTTACCTTTCATATCTTTAAATCGCTTCACAAATTCAATACTAAAATTATGATAATTTTATCTGTGCGTTAACTG TTTTAAATCAAGAGGATGTC
Downstream 100 bases:
>100_bases AGGTGGTGTTATCTTCATCGTTATGGATAGTATTGTTTAGGGAAACGACGAATGTCTTTTGAAGAGAAGTTAATAGCGGC ACATAGTGAACTTGAGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 40
Protein sequence:
>41_residues MGTVIGLVLLAFIAYKVKKQTGLHLHKWIEKKYQEHEDSKK
Sequences:
>Translated_41_residues MGTVIGLVLLAFIAYKVKKQTGLHLHKWIEKKYQEHEDSKK >Mature_40_residues GTVIGLVLLAFIAYKVKKQTGLHLHKWIEKKYQEHEDSKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4810; Mature: 4679
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTVIGLVLLAFIAYKVKKQTGLHLHKWIEKKYQEHEDSKK CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GTVIGLVLLAFIAYKVKKQTGLHLHKWIEKKYQEHEDSKK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA