The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695018

Identifier: 209695018

GI number: 209695018

Start: 1613721

End: 1614158

Strand: Direct

Name: 209695018

Synonym: VSAL_I1510

Alternate gene names: NA

Gene position: 1613721-1614158 (Clockwise)

Preceding gene: 209695017

Following gene: 209695019

Centisome position: 48.53

GC content: 42.69

Gene sequence:

>438_bases
ATGCTCAATGAAAACTTATCTGGCTTAGAATTAATGCAAGCAATGGTGACGGGGGATTTTCCTCATCCATCGATGGCTGA
CGTAGTTCCGATGAAAATCATTTCAGCAGAATATGGCAAAGTGGTCTTTGAAGCGATGGCGGATGATCGGCACTTGAATC
CATTGGGTGGGGTTCATGGTGGCTTCTTTGCCACCGTAATGGATTTGGTCACTGGGTGTTCGGTGCATACAACGCTCGAA
CCTAATATTGGTTATGGAACGATTGATCTTCATGTGAAAATGTTAAAAGCGATACCGAGAAATACGTTATTGATTGCGGA
AAGTCGGGTGATACAGTCAGGTTATTCATTGGGAATATCAGAAGGCAGCTTGAAAGATAAGTTGGGTAATTTATATGCGC
ATGCAACCGCGACTTGTATGATTTATCGAGGAAAATGA

Upstream 100 bases:

>100_bases
TCAAGCTCACATTGTGACTAAGGAATAATGGCTTTCCCTTATTTAAGGGGTATTTTTATTAATGTAAATAAGACGATTAA
TAAAATACTAAGGACATGTG

Downstream 100 bases:

>100_bases
CGGTATTTAATGATAGCCTATTGTTAGTATCAATGATTTTTATTGTTTTAAAGAGGGAGTGAGATGACGTATCCAATTGT
AGGCTCTTGTCAATGTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Thioesterase; Aromatic Compounds Catabolic Protein; PaaI Thioesterase; Aromatic Compounds Degradation Protein PaaI; Domain 1 Protein; Protein Involved In Aromatic Compounds Catabolism; Orf_Bo

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLNENLSGLELMQAMVTGDFPHPSMADVVPMKIISAEYGKVVFEAMADDRHLNPLGGVHGGFFATVMDLVTGCSVHTTLE
PNIGYGTIDLHVKMLKAIPRNTLLIAESRVIQSGYSLGISEGSLKDKLGNLYAHATATCMIYRGK

Sequences:

>Translated_145_residues
MLNENLSGLELMQAMVTGDFPHPSMADVVPMKIISAEYGKVVFEAMADDRHLNPLGGVHGGFFATVMDLVTGCSVHTTLE
PNIGYGTIDLHVKMLKAIPRNTLLIAESRVIQSGYSLGISEGSLKDKLGNLYAHATATCMIYRGK
>Mature_145_residues
MLNENLSGLELMQAMVTGDFPHPSMADVVPMKIISAEYGKVVFEAMADDRHLNPLGGVHGGFFATVMDLVTGCSVHTTLE
PNIGYGTIDLHVKMLKAIPRNTLLIAESRVIQSGYSLGISEGSLKDKLGNLYAHATATCMIYRGK

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15638; Mature: 15638

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNENLSGLELMQAMVTGDFPHPSMADVVPMKIISAEYGKVVFEAMADDRHLNPLGGVHG
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
GFFATVMDLVTGCSVHTTLEPNIGYGTIDLHVKMLKAIPRNTLLIAESRVIQSGYSLGIS
HHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCC
EGSLKDKLGNLYAHATATCMIYRGK
CCHHHHHHHHHHEEEEEEEEEEECC
>Mature Secondary Structure
MLNENLSGLELMQAMVTGDFPHPSMADVVPMKIISAEYGKVVFEAMADDRHLNPLGGVHG
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
GFFATVMDLVTGCSVHTTLEPNIGYGTIDLHVKMLKAIPRNTLLIAESRVIQSGYSLGIS
HHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCC
EGSLKDKLGNLYAHATATCMIYRGK
CCHHHHHHHHHHEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA