Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695019

Identifier: 209695019

GI number: 209695019

Start: 1614222

End: 1614635

Strand: Direct

Name: 209695019

Synonym: VSAL_I1511

Alternate gene names: NA

Gene position: 1614222-1614635 (Clockwise)

Preceding gene: 209695018

Following gene: 209695020

Centisome position: 48.55

GC content: 37.68

Gene sequence:

>414_bases
ATGACGTATCCAATTGTAGGCTCTTGTCAATGTGGGCAAGTAACTTATAAATTATGTGCAGCACCAAAAATGGTGATTGC
TTGTCATTGTAAGGAATGCCAAAAATTATCGACAGCGCCATTCAGTGTTACCGCTATTATCGCAACTGAGGCGATTCAAT
TTGATGGTGAGTTAACTGAGTGGAGTCGATTAGCTGATAGTGGAAATCAAAATAGCGCGAAGTTTTGTTCAACGTGTGGA
AATCGAGTCTATCAATATAATCCTGATGATTTAACAACCATAAAGCTGAAATTAAAACCTGTTGATGTGAAAGATGATCG
TATTTTTGAGCCGAGTATGCATATTTGGGTTTCTGAAAAATTGAGTTGGGTCCAAATTCCTAAGGGAATGGTGACGTTTG
ATAAACAACGTTAA

Upstream 100 bases:

>100_bases
TGCAACCGCGACTTGTATGATTTATCGAGGAAAATGACGGTATTTAATGATAGCCTATTGTTAGTATCAATGATTTTTAT
TGTTTTAAAGAGGGAGTGAG

Downstream 100 bases:

>100_bases
TGATAAAGATTAGGAGCTCATGTGTTATTTAAGTTGATTTTTCTGTTTGCCGCATTAACGCTACATGGTGTAAAGAGATC
CCCTTATCCGCCGACATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Lipoprotein

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTYPIVGSCQCGQVTYKLCAAPKMVIACHCKECQKLSTAPFSVTAIIATEAIQFDGELTEWSRLADSGNQNSAKFCSTCG
NRVYQYNPDDLTTIKLKLKPVDVKDDRIFEPSMHIWVSEKLSWVQIPKGMVTFDKQR

Sequences:

>Translated_137_residues
MTYPIVGSCQCGQVTYKLCAAPKMVIACHCKECQKLSTAPFSVTAIIATEAIQFDGELTEWSRLADSGNQNSAKFCSTCG
NRVYQYNPDDLTTIKLKLKPVDVKDDRIFEPSMHIWVSEKLSWVQIPKGMVTFDKQR
>Mature_136_residues
TYPIVGSCQCGQVTYKLCAAPKMVIACHCKECQKLSTAPFSVTAIIATEAIQFDGELTEWSRLADSGNQNSAKFCSTCGN
RVYQYNPDDLTTIKLKLKPVDVKDDRIFEPSMHIWVSEKLSWVQIPKGMVTFDKQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15388; Mature: 15257

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYPIVGSCQCGQVTYKLCAAPKMVIACHCKECQKLSTAPFSVTAIIATEAIQFDGELTE
CCCCCCCCCCCCHHHHHHHCCCCEEEEEECHHHHHCCCCCCEEEEEEEEEEEECCCCHHH
WSRLADSGNQNSAKFCSTCGNRVYQYNPDDLTTIKLKLKPVDVKDDRIFEPSMHIWVSEK
HHHHHCCCCCCCHHHHHHHCCCCEEECCCCEEEEEEEEEECCCCCCEEECCCEEEEEECC
LSWVQIPKGMVTFDKQR
CEEEECCCCCEEECCCC
>Mature Secondary Structure 
TYPIVGSCQCGQVTYKLCAAPKMVIACHCKECQKLSTAPFSVTAIIATEAIQFDGELTE
CCCCCCCCCCCHHHHHHHCCCCEEEEEECHHHHHCCCCCCEEEEEEEEEEEECCCCHHH
WSRLADSGNQNSAKFCSTCGNRVYQYNPDDLTTIKLKLKPVDVKDDRIFEPSMHIWVSEK
HHHHHCCCCCCCHHHHHHHCCCCEEECCCCEEEEEEEEEECCCCCCEEECCCEEEEEECC
LSWVQIPKGMVTFDKQR
CEEEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA