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The map label for this gene is ycfP [C]

Identifier: 209694844

GI number: 209694844

Start: 1421218

End: 1421769

Strand: Direct

Name: ycfP [C]

Synonym: VSAL_I1310

Alternate gene names: 209694844

Gene position: 1421218-1421769 (Clockwise)

Preceding gene: 209694841

Following gene: 209694845

Centisome position: 42.74

GC content: 39.13

Gene sequence:

>552_bases
ATGATTATTTATCTTCACGGCTTCGACTCAACCAGCCCAGGTAATCATGAAAAAGTGATGCAGCTTCAATTCATTGATGA
AGATGTACGTTTTATTAATTACAGCACTCTGCATCCTAAACATGATATGCAGCACTTATTGAAAGAAGTGTCTAAAGTGA
TAGAGCAAGCGGGTGATCCAAACCCAATTATTTGCGGTGTCGGCCTCGGTGGGTTCTGGGCGGAGCGTATTGGTTTCTTA
TGTGGTATTCGCCAAGTGATGTTTAATCCTAATTTGCATCCTGAAGTGAACATGGAAGGGCGAATTGATCGACCTGAAGA
ATACGCTGATATTGCAACTAAGTGCATTGAGAAGTTCCGTCAAAAGAATAAAGAGCATTGCTTATGTATTTTATCAAGAA
GTGATGAAATCAGAGATAATGCTGAAACGGCGGCAGAACTTGAACCTTACTACCAAGTGATTTGGGATGAAAGTGAGGGG
CATAAATTTAAAAAAATCTCACAACATCTCCAAGCGATGAAAGTATTTAAAGACGAAGAAACATTGATTTAA

Upstream 100 bases:

>100_bases
TTCTCATTATTGCTCAAGCTAAGGGCTTTAAAACCTTATTTTTCATGGTAGATTAAATTTACTATATGGAAAGTTCTTAT
TCAAGAAACAGGGGGAATAC

Downstream 100 bases:

>100_bases
AGACAAAAACTTATTTTAGTAACATAATCAAAACCTCACTATTTCGTGGGGTTTTTTGATCTAAACCAAAGAAACTCATT
TCTGTTACAAAAACTTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MIIYLHGFDSTSPGNHEKVMQLQFIDEDVRFINYSTLHPKHDMQHLLKEVSKVIEQAGDPNPIICGVGLGGFWAERIGFL
CGIRQVMFNPNLHPEVNMEGRIDRPEEYADIATKCIEKFRQKNKEHCLCILSRSDEIRDNAETAAELEPYYQVIWDESEG
HKFKKISQHLQAMKVFKDEETLI

Sequences:

>Translated_183_residues
MIIYLHGFDSTSPGNHEKVMQLQFIDEDVRFINYSTLHPKHDMQHLLKEVSKVIEQAGDPNPIICGVGLGGFWAERIGFL
CGIRQVMFNPNLHPEVNMEGRIDRPEEYADIATKCIEKFRQKNKEHCLCILSRSDEIRDNAETAAELEPYYQVIWDESEG
HKFKKISQHLQAMKVFKDEETLI
>Mature_183_residues
MIIYLHGFDSTSPGNHEKVMQLQFIDEDVRFINYSTLHPKHDMQHLLKEVSKVIEQAGDPNPIICGVGLGGFWAERIGFL
CGIRQVMFNPNLHPEVNMEGRIDRPEEYADIATKCIEKFRQKNKEHCLCILSRSDEIRDNAETAAELEPYYQVIWDESEG
HKFKKISQHLQAMKVFKDEETLI

Specific function: Unknown

COG id: COG3150

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0227 family [H]

Homologues:

Organism=Escherichia coli, GI87081832, Length=177, Percent_Identity=70.0564971751412, Blast_Score=271, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022987
- InterPro:   IPR008886 [H]

Pfam domain/function: PF05728 UPF0227 [H]

EC number: NA

Molecular weight: Translated: 21232; Mature: 21232

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIYLHGFDSTSPGNHEKVMQLQFIDEDVRFINYSTLHPKHDMQHLLKEVSKVIEQAGDP
CEEEEECCCCCCCCCHHHEEEEEEECCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
NPIICGVGLGGFWAERIGFLCGIRQVMFNPNLHPEVNMEGRIDRPEEYADIATKCIEKFR
CCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QKNKEHCLCILSRSDEIRDNAETAAELEPYYQVIWDESEGHKFKKISQHLQAMKVFKDEE
HCCCCEEEEEECCCCCHHCCHHHHHHHCHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCC
TLI
CCC
>Mature Secondary Structure
MIIYLHGFDSTSPGNHEKVMQLQFIDEDVRFINYSTLHPKHDMQHLLKEVSKVIEQAGDP
CEEEEECCCCCCCCCHHHEEEEEEECCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
NPIICGVGLGGFWAERIGFLCGIRQVMFNPNLHPEVNMEGRIDRPEEYADIATKCIEKFR
CCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QKNKEHCLCILSRSDEIRDNAETAAELEPYYQVIWDESEGHKFKKISQHLQAMKVFKDEE
HCCCCEEEEEECCCCCHHCCHHHHHHHCHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCC
TLI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA