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The map label for this gene is ycfN [C]

Identifier: 209694841

GI number: 209694841

Start: 1419148

End: 1419978

Strand: Direct

Name: ycfN [C]

Synonym: VSAL_I1307

Alternate gene names: 209694841

Gene position: 1419148-1419978 (Clockwise)

Preceding gene: 209694840

Following gene: 209694844

Centisome position: 42.68

GC content: 38.15

Gene sequence:

>831_bases
ATGAGTTTAAATACGCTAAAATTAGATCTTATTCATGTTGAGCCACTCACGGGGGGATTAACTAATGCCTGTTTAAAAGT
AGAAGCGAAAGAGGGGACTTTTGTTTGGCGTCCTGTTTCAGAGCAAGCGAAGTTACTTGGTGCTGATCGATATAAAGAAC
GTGACATTTTAACAGCGTTACATGCAGTCCCTTCTACCCCAAGAGTACATGACTCAAATGAACATGGTTTGTTAGTTGAA
TGGTTTGATGGGGAAGTGATTGCCCTTGATAAAGCTCAAGGTGTTGCGATCGAACTATTAGTCTCCGTCCACCAACTAAT
AATAGATGACTTCACTGATGATATTAAAAATGATGTGATGAGTTTGAAATCACGCATTTTGGATTACTGGTCATCATTAG
AAACAGAAAATAAAACAAGTGAAATGCAAACTTACGTTGACTATTTTTCTACAAAAGAAGAACAGGCTTTGTTTACTCCC
TGTTTATGTCATTATGATATTGGGGCTTATAATATAATTGTAAAGGAAGAAGGCTATGGTTTAATTGATTGGGAGTACGC
TTCTATCGGCGATCCGAGTCAAGATTTAACAACGATGATTATTGCTAATCAGTTTGATGCTGATGAGGTTATTTCTGATT
ATTGTCAGCAGCGTAACGTTGACATCGAACCTTGGCAAAAAGCGGTGACATATTGGACACCTTGGGTGTGCTTTATGGGG
GCGCTATGGTTCACGCTAGGCCATCAATTACTTAAAGATCACTGTTATCAAGAGTTGGCTGAGCGAGAAATGAACAAGCT
AAAGAAATTCTTACCTTTAATTGAGAAATAA

Upstream 100 bases:

>100_bases
AATTCAGATGAGAAATTTAAAAAGGGTTTAAAAGCATTATTTGAACTTCTAAATTCAAACAATAAAACCATGTTTCCATT
TTAAAGAGGCTAGGATACCT

Downstream 100 bases:

>100_bases
ATAAGTAAGTAGTCACGCAAAAGTTATTGTGAATTTTTCGCCGTAATAATTTAATATGTTTTTGATGTTAATACTGAGGT
CTTCAAACGTTTTGAACGCT

Product: antibiotic resistance protein

Products: NA

Alternate protein names: Thiamin Kinase; Phosphotransferase/Kinase; Phosphotransferase Family; Choline Kinase Involved In LPS Biosynthesis; Antibiotic Resistance Protein

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSLNTLKLDLIHVEPLTGGLTNACLKVEAKEGTFVWRPVSEQAKLLGADRYKERDILTALHAVPSTPRVHDSNEHGLLVE
WFDGEVIALDKAQGVAIELLVSVHQLIIDDFTDDIKNDVMSLKSRILDYWSSLETENKTSEMQTYVDYFSTKEEQALFTP
CLCHYDIGAYNIIVKEEGYGLIDWEYASIGDPSQDLTTMIIANQFDADEVISDYCQQRNVDIEPWQKAVTYWTPWVCFMG
ALWFTLGHQLLKDHCYQELAEREMNKLKKFLPLIEK

Sequences:

>Translated_276_residues
MSLNTLKLDLIHVEPLTGGLTNACLKVEAKEGTFVWRPVSEQAKLLGADRYKERDILTALHAVPSTPRVHDSNEHGLLVE
WFDGEVIALDKAQGVAIELLVSVHQLIIDDFTDDIKNDVMSLKSRILDYWSSLETENKTSEMQTYVDYFSTKEEQALFTP
CLCHYDIGAYNIIVKEEGYGLIDWEYASIGDPSQDLTTMIIANQFDADEVISDYCQQRNVDIEPWQKAVTYWTPWVCFMG
ALWFTLGHQLLKDHCYQELAEREMNKLKKFLPLIEK
>Mature_275_residues
SLNTLKLDLIHVEPLTGGLTNACLKVEAKEGTFVWRPVSEQAKLLGADRYKERDILTALHAVPSTPRVHDSNEHGLLVEW
FDGEVIALDKAQGVAIELLVSVHQLIIDDFTDDIKNDVMSLKSRILDYWSSLETENKTSEMQTYVDYFSTKEEQALFTPC
LCHYDIGAYNIIVKEEGYGLIDWEYASIGDPSQDLTTMIIANQFDADEVISDYCQQRNVDIEPWQKAVTYWTPWVCFMGA
LWFTLGHQLLKDHCYQELAEREMNKLKKFLPLIEK

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.21

Molecular weight: Translated: 31673; Mature: 31542

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNTLKLDLIHVEPLTGGLTNACLKVEAKEGTFVWRPVSEQAKLLGADRYKERDILTAL
CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCEEEECCHHHHHHHHCCHHHHHHHHHHHH
HAVPSTPRVHDSNEHGLLVEWFDGEVIALDKAQGVAIELLVSVHQLIIDDFTDDIKNDVM
HHCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLKSRILDYWSSLETENKTSEMQTYVDYFSTKEEQALFTPCLCHYDIGAYNIIVKEEGYG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCEEEEEEEECCCE
LIDWEYASIGDPSQDLTTMIIANQFDADEVISDYCQQRNVDIEPWQKAVTYWTPWVCFMG
EEEEEECCCCCCCHHHHEEEHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ALWFTLGHQLLKDHCYQELAEREMNKLKKFLPLIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLNTLKLDLIHVEPLTGGLTNACLKVEAKEGTFVWRPVSEQAKLLGADRYKERDILTAL
CCCEEEEEEEEECCCCCCCCCCEEEEEECCCEEEECCHHHHHHHHCCHHHHHHHHHHHH
HAVPSTPRVHDSNEHGLLVEWFDGEVIALDKAQGVAIELLVSVHQLIIDDFTDDIKNDVM
HHCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLKSRILDYWSSLETENKTSEMQTYVDYFSTKEEQALFTPCLCHYDIGAYNIIVKEEGYG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCEEEEEEEECCCE
LIDWEYASIGDPSQDLTTMIIANQFDADEVISDYCQQRNVDIEPWQKAVTYWTPWVCFMG
EEEEEECCCCCCCHHHHEEEHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ALWFTLGHQLLKDHCYQELAEREMNKLKKFLPLIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA