| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is secG [H]
Identifier: 209694187
GI number: 209694187
Start: 657222
End: 657554
Strand: Direct
Name: secG [H]
Synonym: VSAL_I0595
Alternate gene names: 209694187
Gene position: 657222-657554 (Clockwise)
Preceding gene: 209694186
Following gene: 209694188
Centisome position: 19.77
GC content: 40.54
Gene sequence:
>333_bases ATGCATACGATTCTACTTGTGATTTATCTGATTGCCGCAGTCGGTGTAATTGGCCTAGTATTGGTACAACACGGTAAAGG CGCAGATATGGGAGCCTCATTTGGGGCTGGAGCATCAAATACAGTATTTGGCTCTGGTGGCTCTGGAAACTTTTTAACTC GAATGACTGCAATTTGTGCAACAGTATTTTTTATTATCAGTTTAGCATTAGGCAATATGTCTACGCACAAATCTGAAGGC TTTGATCTTAAATTAGATCAACAAGCAACAGAGCAAGTAACTGATAATGTGAGTGACGTTCCTGCTACTGAAAACAGCGA CGTTCCTCTTTAA
Upstream 100 bases:
>100_bases AGTAGCCTAGTTTGGTTAATATCCTCCGGCCTCTTAATTGAGAGCGCGCTGGTGTTGCCAATGGGCTACCGGTACATTAA TTAGATACATAGGTGACGGA
Downstream 100 bases:
>100_bases ACGAATTTAGCCGAGATGGTGAAATTGGTAGACACGCTAGCATGAGGTGCTAGTGCCTTAGGGTATGAGGGTTCAAGTCC CTCTCTCGGCACCATATTTC
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: P12; Preprotein translocase band 1 subunit [H]
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MHTILLVIYLIAAVGVIGLVLVQHGKGADMGASFGAGASNTVFGSGGSGNFLTRMTAICATVFFIISLALGNMSTHKSEG FDLKLDQQATEQVTDNVSDVPATENSDVPL
Sequences:
>Translated_110_residues MHTILLVIYLIAAVGVIGLVLVQHGKGADMGASFGAGASNTVFGSGGSGNFLTRMTAICATVFFIISLALGNMSTHKSEG FDLKLDQQATEQVTDNVSDVPATENSDVPL >Mature_110_residues MHTILLVIYLIAAVGVIGLVLVQHGKGADMGASFGAGASNTVFGSGGSGNFLTRMTAICATVFFIISLALGNMSTHKSEG FDLKLDQQATEQVTDNVSDVPATENSDVPL
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
Organism=Escherichia coli, GI1789565, Length=109, Percent_Identity=53.2110091743119, Blast_Score=121, Evalue=9e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 11344; Mature: 11344
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTILLVIYLIAAVGVIGLVLVQHGKGADMGASFGAGASNTVFGSGGSGNFLTRMTAICA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHH TVFFIISLALGNMSTHKSEGFDLKLDQQATEQVTDNVSDVPATENSDVPL HHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MHTILLVIYLIAAVGVIGLVLVQHGKGADMGASFGAGASNTVFGSGGSGNFLTRMTAICA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHH TVFFIISLALGNMSTHKSEGFDLKLDQQATEQVTDNVSDVPATENSDVPL HHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]