| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is glmM
Identifier: 209694186
GI number: 209694186
Start: 655733
End: 657070
Strand: Direct
Name: glmM
Synonym: VSAL_I0594
Alternate gene names: 209694186
Gene position: 655733-657070 (Clockwise)
Preceding gene: 209694185
Following gene: 209694187
Centisome position: 19.72
GC content: 40.73
Gene sequence:
>1338_bases ATGGCTGAGCGTAAATATTTTGGAACAGATGGAGTTCGTGGGTTAGTCGGGCAATCGCCGATTACGCCTGAATTTGTTAT GAAACTTGGTTGGGCTGCTGGAAAAGTATTGGCTAAACAAGGTACAAAGAAAGTTATTATCGGTAAAGACACGCGTATTT CAGGTTACATGTTGGAATCAGCATTAGAAGCGGGTTTAGCTGCCGCAGGCCTTAAAGCGAAGTTCACCGGCCCAATGCCA ACCCCTGCAGTCGCGTATTTAACGCAAACTTTTCGTGCCGAAGCCGGTATTGTTATTTCGGCTTCTCATAATCCGTATTA CGATAATGGCATTAAATTTTTCTCCTCTGAAGGTACGAAATTACCGGATGATGTTGAGATGGCCATTGAAGCTGAACTTG ATAAACCAATGACGTGTGTTGAATCAGCATTATTAGGTAAAGCGTCACGTTTAAATGATGCGGCTGGTCGCTATATCGAG TTTTGTAAAAGTACATTTCCAAAAGAGCTTAGCTTAGCTGGCGTTAAAATGGTTGTCGATTGTGCTCATGGGGCGACATA CCATATTGCCCCTAATGTTTTTAAAGAGCTTGGCGCAGAGATTATTACTATTGGTTGTGAGCCTAATGGTACCAATATCA ATCATGAAGTAGGGGCAACGGATGTTCGCGCCTTACAAGCAAAAGTACTTGAAGAAAAAGCCGATTTTGGTGTCGCTTTT GATGGTGATGGTGACCGCATCATTATGGTTGATGATCTTGGTAATAAAGTTGATGGTGACCAAATTGCCTATATTATTGC TCGTGATGCATTACGTCGTGGTGAGTTAAAAGGTGGCGTTGTAGGCACTCTAATGACCAATATGGGCATGGAAGTAGCTT TGCGTAATTTAGGTATACCTTTTGTACGCTCTAACGTTGGTGACCGCTACGTCATGGAAAAATTATTGGAAAATAATTGG AAAATTGGTGCTGAAAATTCAGGTCATGTTATTTTATTAGACAAAGTAACGACGGGGGATGCAATTGTAGCTGCTCTGCA AGTTATCGCTTCAATTGTTGGCAGTAAAATGTCATTGAAAGAACTTTGTAATGGTATGACGTTATTCCCGCAAGTTTTGG AAAATATCCGTTTTGTTGGTGATAATAATCCATTAGATACCGAGTTAGTTAAAGCAGCTCAGGCTGATGTAGAAACTAAA CTTGGTGATAATGGTCGAGTTTTATTACGAAAATCAGGAACTGAACCATTAATTCGCGTTATGGTTGAAGGTGAAAATGC TGAGCTTGTGCAGCAATATGCTCTTCAAATTGTAGATGCAGTGAAAGAAAGCTGTTAA
Upstream 100 bases:
>100_bases ATATTGTGAAAGTTTGCCAAGCAACATTGGAGCAAGCTTCTTAGTGAGAAGCATGCTCATTTAAAGAATAAATTATTAAA ATTAAAACATGGAGTACAAC
Downstream 100 bases:
>100_bases TTTAAGCAATTAAATGAAATTGAACGTTTTTTGTTAATTTTAGCTTGTCATAGTAGCCTAGTTTGGTTAATATCCTCCGG CCTCTTAATTGAGAGCGCGC
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MAERKYFGTDGVRGLVGQSPITPEFVMKLGWAAGKVLAKQGTKKVIIGKDTRISGYMLESALEAGLAAAGLKAKFTGPMP TPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTKLPDDVEMAIEAELDKPMTCVESALLGKASRLNDAAGRYIE FCKSTFPKELSLAGVKMVVDCAHGATYHIAPNVFKELGAEIITIGCEPNGTNINHEVGATDVRALQAKVLEEKADFGVAF DGDGDRIIMVDDLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNMGMEVALRNLGIPFVRSNVGDRYVMEKLLENNW KIGAENSGHVILLDKVTTGDAIVAALQVIASIVGSKMSLKELCNGMTLFPQVLENIRFVGDNNPLDTELVKAAQADVETK LGDNGRVLLRKSGTEPLIRVMVEGENAELVQQYALQIVDAVKESC
Sequences:
>Translated_445_residues MAERKYFGTDGVRGLVGQSPITPEFVMKLGWAAGKVLAKQGTKKVIIGKDTRISGYMLESALEAGLAAAGLKAKFTGPMP TPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTKLPDDVEMAIEAELDKPMTCVESALLGKASRLNDAAGRYIE FCKSTFPKELSLAGVKMVVDCAHGATYHIAPNVFKELGAEIITIGCEPNGTNINHEVGATDVRALQAKVLEEKADFGVAF DGDGDRIIMVDDLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNMGMEVALRNLGIPFVRSNVGDRYVMEKLLENNW KIGAENSGHVILLDKVTTGDAIVAALQVIASIVGSKMSLKELCNGMTLFPQVLENIRFVGDNNPLDTELVKAAQADVETK LGDNGRVLLRKSGTEPLIRVMVEGENAELVQQYALQIVDAVKESC >Mature_444_residues AERKYFGTDGVRGLVGQSPITPEFVMKLGWAAGKVLAKQGTKKVIIGKDTRISGYMLESALEAGLAAAGLKAKFTGPMPT PAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTKLPDDVEMAIEAELDKPMTCVESALLGKASRLNDAAGRYIEF CKSTFPKELSLAGVKMVVDCAHGATYHIAPNVFKELGAEIITIGCEPNGTNINHEVGATDVRALQAKVLEEKADFGVAFD GDGDRIIMVDDLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNMGMEVALRNLGIPFVRSNVGDRYVMEKLLENNWK IGAENSGHVILLDKVTTGDAIVAALQVIASIVGSKMSLKELCNGMTLFPQVLENIRFVGDNNPLDTELVKAAQADVETKL GDNGRVLLRKSGTEPLIRVMVEGENAELVQQYALQIVDAVKESC
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=443, Percent_Identity=73.8148984198646, Blast_Score=664, Evalue=0.0, Organism=Escherichia coli, GI1788361, Length=443, Percent_Identity=25.2821670428894, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_ALISL (B6END8)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002262114.1 - ProteinModelPortal: B6END8 - GeneID: 6988558 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I0594 - HOGENOM: HBG644964 - OMA: VHDRYIE - ProtClustDB: PRK10887 - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 47788; Mature: 47656
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 102-102
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERKYFGTDGVRGLVGQSPITPEFVMKLGWAAGKVLAKQGTKKVIIGKDTRISGYMLES CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH ALEAGLAAAGLKAKFTGPMPTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTK HHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCC LPDDVEMAIEAELDKPMTCVESALLGKASRLNDAAGRYIEFCKSTFPKELSLAGVKMVVD CCCHHHHHHECCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHEEEEE CAHGATYHIAPNVFKELGAEIITIGCEPNGTNINHEVGATDVRALQAKVLEEKADFGVAF ECCCCEEEECHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE DGDGDRIIMVDDLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNMGMEVALRNLGIP CCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHCCCC FVRSNVGDRYVMEKLLENNWKIGAENSGHVILLDKVTTGDAIVAALQVIASIVGSKMSLK HHHCCCCHHHHHHHHHHCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHH ELCNGMTLFPQVLENIRFVGDNNPLDTELVKAAQADVETKLGDNGRVLLRKSGTEPLIRV HHHCCCCHHHHHHHHCEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEE MVEGENAELVQQYALQIVDAVKESC EECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AERKYFGTDGVRGLVGQSPITPEFVMKLGWAAGKVLAKQGTKKVIIGKDTRISGYMLES CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH ALEAGLAAAGLKAKFTGPMPTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTK HHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCC LPDDVEMAIEAELDKPMTCVESALLGKASRLNDAAGRYIEFCKSTFPKELSLAGVKMVVD CCCHHHHHHECCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHEEEEE CAHGATYHIAPNVFKELGAEIITIGCEPNGTNINHEVGATDVRALQAKVLEEKADFGVAF ECCCCEEEECHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEE DGDGDRIIMVDDLGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNMGMEVALRNLGIP CCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHCCCC FVRSNVGDRYVMEKLLENNWKIGAENSGHVILLDKVTTGDAIVAALQVIASIVGSKMSLK HHHCCCCHHHHHHHHHHCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHH ELCNGMTLFPQVLENIRFVGDNNPLDTELVKAAQADVETKLGDNGRVLLRKSGTEPLIRV HHHCCCCHHHHHHHHCEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEE MVEGENAELVQQYALQIVDAVKESC EECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA