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The map label for this gene is rimP

Identifier: 209694188

GI number: 209694188

Start: 657962

End: 658417

Strand: Direct

Name: rimP

Synonym: VSAL_I0596

Alternate gene names: 209694188

Gene position: 657962-658417 (Clockwise)

Preceding gene: 209694187

Following gene: 209694189

Centisome position: 19.79

GC content: 39.25

Gene sequence:

>456_bases
ATGACAGGATTAGAAAGACAACTAACAGAAATGCTTGAGGCTCCTGTTGGTGCTTTAGGTTATGAATTGGTCGGTTTAGA
ATTTATTCGTGCGGGTGAGCATTCAACGTTACGTGTTTTTATCGATCATGAAAATGGCATATTTGTAGAAGACTGTGCGG
AAGCTAGTCGTCAAATCAGTGCTGTAATGGATGTAGAAGATCCAATCACAGTAGCATATAACCTAGAGGTTTCGTCTCCA
GGTCTTGAACGTCCACTGTTTAAAGCAGCACATTATCAACAATTTGTTGGTCACGAGGTCAGCCTTGTATTAAAGATGCC
GATGAATAACCGTCGTAAATGGAAAGGAGACATTCTGGACATTAACGGTGAAATTGTTACGGTTACAGTTGATGGTAACA
ATGAAGAATTTGCGTTAAGCAACATTTCAAAGGCGAACTTAGTTCCTAAATTTTAA

Upstream 100 bases:

>100_bases
ATTAAACCCCGCAATTATCGGGGTTTTTTGCTATCTGAAACAGACTGTTTTTTAAAAATTGGGCCTTTTAGTGCCCTTTT
TTTGTTTTCAGGGGATATCA

Downstream 100 bases:

>100_bases
GGCTGAAGAGGCTAAAATGAACAAAGAAATCTTAGCTGTTGTAGAAGCAGTATCAAATGAAAAAGCTGTTCCTCGTGAAC
GAATTTTTGAAGCATTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTGLERQLTEMLEAPVGALGYELVGLEFIRAGEHSTLRVFIDHENGIFVEDCAEASRQISAVMDVEDPITVAYNLEVSSP
GLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILDINGEIVTVTVDGNNEEFALSNISKANLVPKF

Sequences:

>Translated_151_residues
MTGLERQLTEMLEAPVGALGYELVGLEFIRAGEHSTLRVFIDHENGIFVEDCAEASRQISAVMDVEDPITVAYNLEVSSP
GLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILDINGEIVTVTVDGNNEEFALSNISKANLVPKF
>Mature_150_residues
TGLERQLTEMLEAPVGALGYELVGLEFIRAGEHSTLRVFIDHENGIFVEDCAEASRQISAVMDVEDPITVAYNLEVSSPG
LERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILDINGEIVTVTVDGNNEEFALSNISKANLVPKF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=68.2119205298013, Blast_Score=216, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_ALISL (B6ENE0)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002262116.1
- GeneID:   6988113
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I0596
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- ProtClustDB:   PRK00092
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 16803; Mature: 16672

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLERQLTEMLEAPVGALGYELVGLEFIRAGEHSTLRVFIDHENGIFVEDCAEASRQIS
CCCHHHHHHHHHHCCCCHHHHHHHCEEEEECCCCCEEEEEEECCCCEEHHHHHHHHHHEE
AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILD
EEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEE
INGEIVTVTVDGNNEEFALSNISKANLVPKF
ECCEEEEEEECCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TGLERQLTEMLEAPVGALGYELVGLEFIRAGEHSTLRVFIDHENGIFVEDCAEASRQIS
CCHHHHHHHHHHCCCCHHHHHHHCEEEEECCCCCEEEEEEECCCCEEHHHHHHHHHHEE
AVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEVSLVLKMPMNNRRKWKGDILD
EEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEE
INGEIVTVTVDGNNEEFALSNISKANLVPKF
ECCEEEEEEECCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA