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The map label for this gene is mshN

Identifier: 209694068

GI number: 209694068

Start: 527603

End: 528676

Strand: Direct

Name: mshN

Synonym: VSAL_I0471

Alternate gene names: NA

Gene position: 527603-528676 (Clockwise)

Preceding gene: 209694067

Following gene: 209694069

Centisome position: 15.87

GC content: 39.94

Gene sequence:

>1074_bases
GTGAGTGTCACCAATAAAGCTCTATTGAATATCACTAAAGCAAAATCAGATGTTGAGAATACATCGACGATTTCGCCTGC
GATAGTGCCAAATATGGAATCAAGATTTAAAGCGCCTTTCTTTTTTGCTATTGGTTTATTAAGTTCAATTTCAGTTCTCG
GTTGGGCTACGTTAAATAACGAGCCAACACCGGTTACGACTCCCATCGCTAATGATGCAGCGGTCGTTGAGTTAGCCTCC
AATTCTCCGACAAAAAACAGCACACCTGAATCCGTCAGTTCGATTTATTTATCTGAAAGCCGTGATAAAACGGAAAAGCA
GGCAGCAAAAATAACGACTCCAGTGCCGACTGCAATTATTAAGACGGCATCAACAGCAGAAAAACCAACAGTAAAGAATG
AAAATACGGTACCAGTCATTTCTACTAAGCAGAACGTTAAGTCTGAAAGTGATGCATTTTATGTCGAAGAAGTTGAGTTG
TTACCTTCTGAATTAGCAGAGAAAAGTAGATCCGCAGCGAGAAAAGCACTTGATGAATCGGATTTTAAACAAGCCATTCT
TGAGTACTATACCGTACTTAAATATCAGCCAAGAGATGACGATTCACGTAAGAAGTTAGCTGCATTACTCTATGGTAAGC
ATCAAGTGAAAGAAGCGGCGGTCGTTTTGCAGCAGGGAATAAAGCTAGATAATGACAGCGTGACTTTGCGTTTAGCGTTG
GCAAGTTTATTACAAAGAGAAGAGCAGCCAGAAGCGGCGTTATCTGTTGTCGAATACATTCCTTTAGAAGCCTCTATTGA
TTATTTAGCCACGCGTGGTGGGTTAGCTCAACAATTAAAATTTATCGATTTAGCAAAAGAAAGCTATCAAATGCTCGTCA
ATAAAGACCCTGATAATGGTCGTTGGTGGTTAGGTCTTGCCATTGTTTATGAGAGAGAAGCAGAGATTGATAAAGCTTAT
GATACTTATCAATCAGCATTGATTAAGCCGGGCTTATCCCGCTCATCTCAAGTGTTTGTTCGAGACCGAATTAAGTTATT
AGAGACAATGAAGGAAGTGAATAATGCGTCTTAA

Upstream 100 bases:

>100_bases
TTATCGTATCTTCTCGTTCTGTTTTTAGTGCCATTAAAGATACAACAGACACAATGAAACCTACCTATTATTTCCCTAAG
TTTTGGGGTTGGAGAAAAGC

Downstream 100 bases:

>100_bases
GTTAAGAAAAAGACTTGGTGATCTATTAGTCGAAGAAAACATTGTCTCAGAAGCACAGATAGAACAAGCGCTGGCTGCGC
AGAAAAAAACGGGACGTAAA

Product: type IV pilus, mannose-sensitive hemagglutinin D (MSHN)

Products: NA

Alternate protein names: MSHA Biogenesis Protein MshN; Mannose-Sensitive Agglutinin; Msha Biogenesis Protein Mshn; TPR Domain-Containing Protein; Type IV Pilus Mannose-Sensitive Hemagglutinin D; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSVTNKALLNITKAKSDVENTSTISPAIVPNMESRFKAPFFFAIGLLSSISVLGWATLNNEPTPVTTPIANDAAVVELAS
NSPTKNSTPESVSSIYLSESRDKTEKQAAKITTPVPTAIIKTASTAEKPTVKNENTVPVISTKQNVKSESDAFYVEEVEL
LPSELAEKSRSAARKALDESDFKQAILEYYTVLKYQPRDDDSRKKLAALLYGKHQVKEAAVVLQQGIKLDNDSVTLRLAL
ASLLQREEQPEAALSVVEYIPLEASIDYLATRGGLAQQLKFIDLAKESYQMLVNKDPDNGRWWLGLAIVYEREAEIDKAY
DTYQSALIKPGLSRSSQVFVRDRIKLLETMKEVNNAS

Sequences:

>Translated_357_residues
MSVTNKALLNITKAKSDVENTSTISPAIVPNMESRFKAPFFFAIGLLSSISVLGWATLNNEPTPVTTPIANDAAVVELAS
NSPTKNSTPESVSSIYLSESRDKTEKQAAKITTPVPTAIIKTASTAEKPTVKNENTVPVISTKQNVKSESDAFYVEEVEL
LPSELAEKSRSAARKALDESDFKQAILEYYTVLKYQPRDDDSRKKLAALLYGKHQVKEAAVVLQQGIKLDNDSVTLRLAL
ASLLQREEQPEAALSVVEYIPLEASIDYLATRGGLAQQLKFIDLAKESYQMLVNKDPDNGRWWLGLAIVYEREAEIDKAY
DTYQSALIKPGLSRSSQVFVRDRIKLLETMKEVNNAS
>Mature_356_residues
SVTNKALLNITKAKSDVENTSTISPAIVPNMESRFKAPFFFAIGLLSSISVLGWATLNNEPTPVTTPIANDAAVVELASN
SPTKNSTPESVSSIYLSESRDKTEKQAAKITTPVPTAIIKTASTAEKPTVKNENTVPVISTKQNVKSESDAFYVEEVELL
PSELAEKSRSAARKALDESDFKQAILEYYTVLKYQPRDDDSRKKLAALLYGKHQVKEAAVVLQQGIKLDNDSVTLRLALA
SLLQREEQPEAALSVVEYIPLEASIDYLATRGGLAQQLKFIDLAKESYQMLVNKDPDNGRWWLGLAIVYEREAEIDKAYD
TYQSALIKPGLSRSSQVFVRDRIKLLETMKEVNNAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39391; Mature: 39260

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTNKALLNITKAKSDVENTSTISPAIVPNMESRFKAPFFFAIGLLSSISVLGWATLNN
CCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHCCHHHHHHHHHHHHHHHEEEECCC
EPTPVTTPIANDAAVVELASNSPTKNSTPESVSSIYLSESRDKTEKQAAKITTPVPTAII
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH
KTASTAEKPTVKNENTVPVISTKQNVKSESDAFYVEEVELLPSELAEKSRSAARKALDES
HCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHH
DFKQAILEYYTVLKYQPRDDDSRKKLAALLYGKHQVKEAAVVLQQGIKLDNDSVTLRLAL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHH
ASLLQREEQPEAALSVVEYIPLEASIDYLATRGGLAQQLKFIDLAKESYQMLVNKDPDNG
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
RWWLGLAIVYEREAEIDKAYDTYQSALIKPGLSRSSQVFVRDRIKLLETMKEVNNAS
EEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVTNKALLNITKAKSDVENTSTISPAIVPNMESRFKAPFFFAIGLLSSISVLGWATLNN
CCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHCCHHHHHHHHHHHHHHHEEEECCC
EPTPVTTPIANDAAVVELASNSPTKNSTPESVSSIYLSESRDKTEKQAAKITTPVPTAII
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH
KTASTAEKPTVKNENTVPVISTKQNVKSESDAFYVEEVELLPSELAEKSRSAARKALDES
HCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHH
DFKQAILEYYTVLKYQPRDDDSRKKLAALLYGKHQVKEAAVVLQQGIKLDNDSVTLRLAL
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHH
ASLLQREEQPEAALSVVEYIPLEASIDYLATRGGLAQQLKFIDLAKESYQMLVNKDPDNG
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
RWWLGLAIVYEREAEIDKAYDTYQSALIKPGLSRSSQVFVRDRIKLLETMKEVNNAS
EEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA