Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is mshG [H]

Identifier: 209694069

GI number: 209694069

Start: 530410

End: 531636

Strand: Direct

Name: mshG [H]

Synonym: VSAL_I0473

Alternate gene names: 209694069

Gene position: 530410-531636 (Clockwise)

Preceding gene: 209694068

Following gene: 209694070

Centisome position: 15.95

GC content: 41.16

Gene sequence:

>1227_bases
ATGGCGATGTTTAAATACAGTGGTCGAAATGCACGTGGCATACAAGTGTCTGGTCGTGTTGAATCGGTTTCTCAAGAAGG
GGCTGCTGAGCAATTGATGAATGAAGGGATTATCCCAACCTCCATTGTTGCGAGTAAGTTTGGCTCTTCATCAAGTACGT
TAGATTGGAAGAAATGGTTTCAACCTAATATTCCTTTAGATGTATTAGTGATTTTTTGTCGTCAAATGTACAGCTTAACT
AAAGCGGGTGTGCCGCTATTACGTGCAATGAATGGGTTATCACAAAACAGCAGCAATAAGATATTAAAAAAAGCATTGGA
CGAAGTAACCAGTGACTTAACCAATGGCCGCAGTTTGTCTGTGTCTATGCAGCAGCATCCTCATGTGTTTAGTTCACTTT
TTGTCTCTATGATTCATGTGGGAGAGAATACGGGTCGTTTAGATCAGGCTCTGATGCAGTTAGCGAGCTACTACGAACAA
GAAATGGAAACACGTAAGCGAATCAAATCTGCCATGCGTTATCCTATTTTTGTTCTGAGTTTTATCTTACTGGCGATGTT
TGTATTGAACGTTAAAGTGATTCCACAGTTTACGAGTATGTTTGCTCGCTTTGGGGTTGAACTGCCTTTACCTACTCGAA
TATTAATGGCGACATCCAGTTTCTTTGTTAATTATTGGCATGTGCTAATCGCCGCAATGGCGGGGGCATTTTGTGCTTTT
CAAGCTTGGATTAGTCGAGATGACGGAAGAGAAAAGTGGGATAAGTTTCGTTTAAAGGTGCCAATTGTGGGAGATATTGT
CACTCGGGCACAAATGTCGCGTTTTTCTCGTACCTTTGCATTGATGCTTAAATCGGGTGTTCCATTGAATCAATCGTTAG
CGCTTTCTGCCGAAGCACTAGGAAATAAGTATTTAGAAAATCGTTTATTAGAAATGAAAAACGGCATTGAATCGGGCACC
AGTATGTCGGCAACTGCGGCGCAAAGCGGTATTTTCACTCCGCTTGTTCAACAGATGATTGCGGTTGGTGAAGAAACTGG
ACAAATAGATGATCTCTTACTGGAAGTCTCCGATTTCTATGACAGAGAAGTCGATTATGATTTAAGAACATTAACCGCCA
GAATTGAGCCTTTACTTTTGGTTGTTGTGGCCGGAATGGTCTTAATTTTAGCGTTGGGTATTTTCTTACCAATGTGGAAT
ATGTTGGATGTAGTGAAGGGTTCATAA

Upstream 100 bases:

>100_bases
TTAGCAATGAATGGCATCATCAGTCTTGATGAAGTTATGATCCTTGGTGAAGGGGACAATGCCGCCTCTCATCAGCCAAT
ATTGATGTAAGGCGTTAATA

Downstream 100 bases:

>100_bases
TGGTGTCATCGTCCCGAATTATGTGGGGGACAATATTCGTTATTCTGTTAGCTACGATTATGTGGCAATGGAATAAAATG
GAACCCGAAGTTGAAAATGC

Product: type IV pilus, mannose-sensitive hemagglutinin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAMFKYSGRNARGIQVSGRVESVSQEGAAEQLMNEGIIPTSIVASKFGSSSSTLDWKKWFQPNIPLDVLVIFCRQMYSLT
KAGVPLLRAMNGLSQNSSNKILKKALDEVTSDLTNGRSLSVSMQQHPHVFSSLFVSMIHVGENTGRLDQALMQLASYYEQ
EMETRKRIKSAMRYPIFVLSFILLAMFVLNVKVIPQFTSMFARFGVELPLPTRILMATSSFFVNYWHVLIAAMAGAFCAF
QAWISRDDGREKWDKFRLKVPIVGDIVTRAQMSRFSRTFALMLKSGVPLNQSLALSAEALGNKYLENRLLEMKNGIESGT
SMSATAAQSGIFTPLVQQMIAVGEETGQIDDLLLEVSDFYDREVDYDLRTLTARIEPLLLVVVAGMVLILALGIFLPMWN
MLDVVKGS

Sequences:

>Translated_408_residues
MAMFKYSGRNARGIQVSGRVESVSQEGAAEQLMNEGIIPTSIVASKFGSSSSTLDWKKWFQPNIPLDVLVIFCRQMYSLT
KAGVPLLRAMNGLSQNSSNKILKKALDEVTSDLTNGRSLSVSMQQHPHVFSSLFVSMIHVGENTGRLDQALMQLASYYEQ
EMETRKRIKSAMRYPIFVLSFILLAMFVLNVKVIPQFTSMFARFGVELPLPTRILMATSSFFVNYWHVLIAAMAGAFCAF
QAWISRDDGREKWDKFRLKVPIVGDIVTRAQMSRFSRTFALMLKSGVPLNQSLALSAEALGNKYLENRLLEMKNGIESGT
SMSATAAQSGIFTPLVQQMIAVGEETGQIDDLLLEVSDFYDREVDYDLRTLTARIEPLLLVVVAGMVLILALGIFLPMWN
MLDVVKGS
>Mature_407_residues
AMFKYSGRNARGIQVSGRVESVSQEGAAEQLMNEGIIPTSIVASKFGSSSSTLDWKKWFQPNIPLDVLVIFCRQMYSLTK
AGVPLLRAMNGLSQNSSNKILKKALDEVTSDLTNGRSLSVSMQQHPHVFSSLFVSMIHVGENTGRLDQALMQLASYYEQE
METRKRIKSAMRYPIFVLSFILLAMFVLNVKVIPQFTSMFARFGVELPLPTRILMATSSFFVNYWHVLIAAMAGAFCAFQ
AWISRDDGREKWDKFRLKVPIVGDIVTRAQMSRFSRTFALMLKSGVPLNQSLALSAEALGNKYLENRLLEMKNGIESGTS
MSATAAQSGIFTPLVQQMIAVGEETGQIDDLLLEVSDFYDREVDYDLRTLTARIEPLLLVVVAGMVLILALGIFLPMWNM
LDVVKGS

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=398, Percent_Identity=27.1356783919598, Blast_Score=182, Evalue=5e-47,
Organism=Escherichia coli, GI1786295, Length=338, Percent_Identity=25.1479289940828, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 45492; Mature: 45361

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMFKYSGRNARGIQVSGRVESVSQEGAAEQLMNEGIIPTSIVASKFGSSSSTLDWKKWF
CCEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHC
QPNIPLDVLVIFCRQMYSLTKAGVPLLRAMNGLSQNSSNKILKKALDEVTSDLTNGRSLS
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEE
VSMQQHPHVFSSLFVSMIHVGENTGRLDQALMQLASYYEQEMETRKRIKSAMRYPIFVLS
EEHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FILLAMFVLNVKVIPQFTSMFARFGVELPLPTRILMATSSFFVNYWHVLIAAMAGAFCAF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAWISRDDGREKWDKFRLKVPIVGDIVTRAQMSRFSRTFALMLKSGVPLNQSLALSAEAL
HHHHCCCCCHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GNKYLENRLLEMKNGIESGTSMSATAAQSGIFTPLVQQMIAVGEETGQIDDLLLEVSDFY
HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DREVDYDLRTLTARIEPLLLVVVAGMVLILALGIFLPMWNMLDVVKGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AMFKYSGRNARGIQVSGRVESVSQEGAAEQLMNEGIIPTSIVASKFGSSSSTLDWKKWF
CEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHC
QPNIPLDVLVIFCRQMYSLTKAGVPLLRAMNGLSQNSSNKILKKALDEVTSDLTNGRSLS
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEE
VSMQQHPHVFSSLFVSMIHVGENTGRLDQALMQLASYYEQEMETRKRIKSAMRYPIFVLS
EEHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FILLAMFVLNVKVIPQFTSMFARFGVELPLPTRILMATSSFFVNYWHVLIAAMAGAFCAF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAWISRDDGREKWDKFRLKVPIVGDIVTRAQMSRFSRTFALMLKSGVPLNQSLALSAEAL
HHHHCCCCCHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GNKYLENRLLEMKNGIESGTSMSATAAQSGIFTPLVQQMIAVGEETGQIDDLLLEVSDFY
HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DREVDYDLRTLTARIEPLLLVVVAGMVLILALGIFLPMWNMLDVVKGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]