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The map label for this gene is mshM [H]

Identifier: 209694067

GI number: 209694067

Start: 526758

End: 527606

Strand: Direct

Name: mshM [H]

Synonym: VSAL_I0470

Alternate gene names: 209694067

Gene position: 526758-527606 (Clockwise)

Preceding gene: 209694066

Following gene: 209694068

Centisome position: 15.84

GC content: 38.52

Gene sequence:

>849_bases
ATGTATGAATCCCATTTTGGGCTGAAGCAGCTTCCATTTACGCTTACGCCAAACACATCGCTTTTCCATGGATTGTTGCC
TCATTATGAAGCAATTCAAACCGTGTTATCTGCGATATCAATGGGAGAGGGAGTCATCAAAGTAACGGGCGAAATTGGCA
CTGGAAAAACACTAGTCTGCAGAATGCTAATGAATCAGCTGCCGAGTAATGTTGAGTTACTTTATTTGCCTAATCCTGTG
ATGAATGGACATGAATTACGTCAAGCGTTAGCAAAAGAGTTAAGGATTGAACAGCATGGAGACGATATTGCTTTAACGGA
TCGTATTCATGAGAAAATTATAGAGTTACAAGCACTAGGAAAAACAGCCGTTGTTTTTCTTGATGAAGCTCAGGCATTAA
GTGATGAAGCATTAGAAACCTTACGATTGTTTGGCAATTTAGAAACCGACTATAAAAAATTATTACAGATAGTGTTGTTT
GGTCAGCCCGAATTAGATGAAAGATTACAGCAATACCATTTAAGACAACTTCGTCAACGAATTACGTTTTCAGCCACATT
AAGACCATTAACTATGAGTGAAACGGTGGCTTATATTCGTTTCCGAATGACTGAATCTGGGTGTGAAGTGAATCCTTTTT
CATTGACTCAAATGAAAGCTATTTGGCGAGCGACAACAGGGGTTCCGCGGTTGATTAATCAGGTATGCCATAAATCATTG
TTAATTTCGTTTTCTGAGCAGTTAATTATCGTATCTTCTCGTTCTGTTTTTAGTGCCATTAAAGATACAACAGACACAAT
GAAACCTACCTATTATTTCCCTAAGTTTTGGGGTTGGAGAAAAGCGTGA

Upstream 100 bases:

>100_bases
CTTAAGCCAACGGTTGTTGGGGTTGATACATGGCAAGAAGAGTTAGAACGCTCACGTGATCTTTTGCAAGAATGGTTTCC
TGACGAGTAATCGATAGATT

Downstream 100 bases:

>100_bases
GTGTCACCAATAAAGCTCTATTGAATATCACTAAAGCAAAATCAGATGTTGAGAATACATCGACGATTTCGCCTGCGATA
GTGCCAAATATGGAATCAAG

Product: type IV pilus, mannose-sensitive hemagglutinin D (MSHM)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MYESHFGLKQLPFTLTPNTSLFHGLLPHYEAIQTVLSAISMGEGVIKVTGEIGTGKTLVCRMLMNQLPSNVELLYLPNPV
MNGHELRQALAKELRIEQHGDDIALTDRIHEKIIELQALGKTAVVFLDEAQALSDEALETLRLFGNLETDYKKLLQIVLF
GQPELDERLQQYHLRQLRQRITFSATLRPLTMSETVAYIRFRMTESGCEVNPFSLTQMKAIWRATTGVPRLINQVCHKSL
LISFSEQLIIVSSRSVFSAIKDTTDTMKPTYYFPKFWGWRKA

Sequences:

>Translated_282_residues
MYESHFGLKQLPFTLTPNTSLFHGLLPHYEAIQTVLSAISMGEGVIKVTGEIGTGKTLVCRMLMNQLPSNVELLYLPNPV
MNGHELRQALAKELRIEQHGDDIALTDRIHEKIIELQALGKTAVVFLDEAQALSDEALETLRLFGNLETDYKKLLQIVLF
GQPELDERLQQYHLRQLRQRITFSATLRPLTMSETVAYIRFRMTESGCEVNPFSLTQMKAIWRATTGVPRLINQVCHKSL
LISFSEQLIIVSSRSVFSAIKDTTDTMKPTYYFPKFWGWRKA
>Mature_282_residues
MYESHFGLKQLPFTLTPNTSLFHGLLPHYEAIQTVLSAISMGEGVIKVTGEIGTGKTLVCRMLMNQLPSNVELLYLPNPV
MNGHELRQALAKELRIEQHGDDIALTDRIHEKIIELQALGKTAVVFLDEAQALSDEALETLRLFGNLETDYKKLLQIVLF
GQPELDERLQQYHLRQLRQRITFSATLRPLTMSETVAYIRFRMTESGCEVNPFSLTQMKAIWRATTGVPRLINQVCHKSL
LISFSEQLIIVSSRSVFSAIKDTTDTMKPTYYFPKFWGWRKA

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3267

COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)

Gene ontology:

Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exeA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR002477 [H]

Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]

EC number: NA

Molecular weight: Translated: 32159; Mature: 32159

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYESHFGLKQLPFTLTPNTSLFHGLLPHYEAIQTVLSAISMGEGVIKVTGEIGTGKTLVC
CCCCCCCHHHCCEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
RMLMNQLPSNVELLYLPNPVMNGHELRQALAKELRIEQHGDDIALTDRIHEKIIELQALG
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCC
KTAVVFLDEAQALSDEALETLRLFGNLETDYKKLLQIVLFGQPELDERLQQYHLRQLRQR
CEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ITFSATLRPLTMSETVAYIRFRMTESGCEVNPFSLTQMKAIWRATTGVPRLINQVCHKSL
HHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
LISFSEQLIIVSSRSVFSAIKDTTDTMKPTYYFPKFWGWRKA
HHHCCCCEEEEECHHHHHHHHHHHHCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MYESHFGLKQLPFTLTPNTSLFHGLLPHYEAIQTVLSAISMGEGVIKVTGEIGTGKTLVC
CCCCCCCHHHCCEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
RMLMNQLPSNVELLYLPNPVMNGHELRQALAKELRIEQHGDDIALTDRIHEKIIELQALG
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCC
KTAVVFLDEAQALSDEALETLRLFGNLETDYKKLLQIVLFGQPELDERLQQYHLRQLRQR
CEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ITFSATLRPLTMSETVAYIRFRMTESGCEVNPFSLTQMKAIWRATTGVPRLINQVCHKSL
HHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
LISFSEQLIIVSSRSVFSAIKDTTDTMKPTYYFPKFWGWRKA
HHHCCCCEEEEECHHHHHHHHHHHHCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961440 [H]