The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209693991

Identifier: 209693991

GI number: 209693991

Start: 428844

End: 429683

Strand: Reverse

Name: 209693991

Synonym: VSAL_I0389

Alternate gene names: NA

Gene position: 429683-428844 (Counterclockwise)

Preceding gene: 209693994

Following gene: 209693989

Centisome position: 12.92

GC content: 33.69

Gene sequence:

>840_bases
ATGTTAAAAAATTGGACAGTCATAACTCAGGCGGTGAAGAATGGTGCTGATGGCATAATGGCAAGAGAAAGGTACTTACT
ATCAACTCAACATCCAAATCATAAACACACTGAGTTAATCATTCCTATTATAGGAAATAAAAATACATCTCTACGCATCG
CAATCGCTGGCGAAAAATTTAAGCTACAACAAAAAATAAATAACAAAAAAGGTGGTAGACCACTTTCAAGCTTCGGAATG
GAATATTGTCTAACGCTACCCAAAATACATCGACCAACGCCTCAACAATGGAGAGCTATTATTGCAGATTGTTGTATGTG
CTTAGCCTATACCTTGAAACTAAATCCTAACGAACTCATACAATACAAATCTCAGATTCGTGCAGTTTTGCATCAACAAC
CTCAAATAGGTCGAACTGGTTCAGGAGACCATGTTCACCTCATCATAGGTAAGGTAATAAACAATAAGGTATTAAAAGAA
CTTCAACAAAAAAAAGTAACATCATTAATCAAACAAGCATTTAACACTGCAGTTCTCAAACATGTAGGTTTAGATCATCG
GGAATACAAAACTTATGAATTATCTCGTGGTAAACGATTAGAAACGTGGAAGTATCAGCATCAAAAAGCCGAAGAATCTA
TCTGCATTCAGAAAAATATCATAAAATTACAGAATCAAACAAACAAATGGTTAACAGCATTTGAACTATCAAACTTTAAG
AATAAAAACAGGCAGTTCAACCGACTAATAAAAACATTTGACTTATTATCAACATATTCTTTATCCCCAGAACAACAAAG
ACAGATAGATAGCATGAAGGCAATAATTAATAAAATATAG

Upstream 100 bases:

>100_bases
AGCGAAGCTAGGTTGTCCTATCTGGAATAGCCATAAATATAAGAGTTGAATATCAGTTATTTGCAAAATAGTACATAGAT
TCTTATTCTTATAGAAAACA

Downstream 100 bases:

>100_bases
TCCACGGTTAATGGACTATATTAGGCTCTTTATCGAGGCGTAACTATTTCAACAGCGTCTGAAAATATTCTGGAGAAAAT
GCGCTCTCGATACTATGTCC

Product: phage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLKNWTVITQAVKNGADGIMARERYLLSTQHPNHKHTELIIPIIGNKNTSLRIAIAGEKFKLQQKINNKKGGRPLSSFGM
EYCLTLPKIHRPTPQQWRAIIADCCMCLAYTLKLNPNELIQYKSQIRAVLHQQPQIGRTGSGDHVHLIIGKVINNKVLKE
LQQKKVTSLIKQAFNTAVLKHVGLDHREYKTYELSRGKRLETWKYQHQKAEESICIQKNIIKLQNQTNKWLTAFELSNFK
NKNRQFNRLIKTFDLLSTYSLSPEQQRQIDSMKAIINKI

Sequences:

>Translated_279_residues
MLKNWTVITQAVKNGADGIMARERYLLSTQHPNHKHTELIIPIIGNKNTSLRIAIAGEKFKLQQKINNKKGGRPLSSFGM
EYCLTLPKIHRPTPQQWRAIIADCCMCLAYTLKLNPNELIQYKSQIRAVLHQQPQIGRTGSGDHVHLIIGKVINNKVLKE
LQQKKVTSLIKQAFNTAVLKHVGLDHREYKTYELSRGKRLETWKYQHQKAEESICIQKNIIKLQNQTNKWLTAFELSNFK
NKNRQFNRLIKTFDLLSTYSLSPEQQRQIDSMKAIINKI
>Mature_279_residues
MLKNWTVITQAVKNGADGIMARERYLLSTQHPNHKHTELIIPIIGNKNTSLRIAIAGEKFKLQQKINNKKGGRPLSSFGM
EYCLTLPKIHRPTPQQWRAIIADCCMCLAYTLKLNPNELIQYKSQIRAVLHQQPQIGRTGSGDHVHLIIGKVINNKVLKE
LQQKKVTSLIKQAFNTAVLKHVGLDHREYKTYELSRGKRLETWKYQHQKAEESICIQKNIIKLQNQTNKWLTAFELSNFK
NKNRQFNRLIKTFDLLSTYSLSPEQQRQIDSMKAIINKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32291; Mature: 32291

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNWTVITQAVKNGADGIMARERYLLSTQHPNHKHTELIIPIIGNKNTSLRIAIAGEKF
CCCCHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCEEEEEEECCCCCEEEEEECCCHH
KLQQKINNKKGGRPLSSFGMEYCLTLPKIHRPTPQQWRAIIADCCMCLAYTLKLNPNELI
HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
QYKSQIRAVLHQQPQIGRTGSGDHVHLIIGKVINNKVLKELQQKKVTSLIKQAFNTAVLK
HHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HVGLDHREYKTYELSRGKRLETWKYQHQKAEESICIQKNIIKLQNQTNKWLTAFELSNFK
HHCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHH
NKNRQFNRLIKTFDLLSTYSLSPEQQRQIDSMKAIINKI
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKNWTVITQAVKNGADGIMARERYLLSTQHPNHKHTELIIPIIGNKNTSLRIAIAGEKF
CCCCHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCEEEEEEECCCCCEEEEEECCCHH
KLQQKINNKKGGRPLSSFGMEYCLTLPKIHRPTPQQWRAIIADCCMCLAYTLKLNPNELI
HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
QYKSQIRAVLHQQPQIGRTGSGDHVHLIIGKVINNKVLKELQQKKVTSLIKQAFNTAVLK
HHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HVGLDHREYKTYELSRGKRLETWKYQHQKAEESICIQKNIIKLQNQTNKWLTAFELSNFK
HHCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHH
NKNRQFNRLIKTFDLLSTYSLSPEQQRQIDSMKAIINKI
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA