Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is zur [H]
Identifier: 209693989
GI number: 209693989
Start: 427496
End: 427945
Strand: Reverse
Name: zur [H]
Synonym: VSAL_I0387
Alternate gene names: 209693989
Gene position: 427945-427496 (Counterclockwise)
Preceding gene: 209693991
Following gene: 209693988
Centisome position: 12.87
GC content: 36.67
Gene sequence:
>450_bases TTGAATAGTTCTCAAAAACAAAAAGTTGAGCAGTTATGCCAACAGCGTGGCGTTAGATTGACTCAACAACGGTTAACTGT TTTAGAGCTTATTGTCATCCACCATGGTGCCATTAGTGCTTACGATCTATTAGAACAATTAAAAAAAATAGAACCCCAAG CAAAACCGCCTACCATTTATCGCGCTTTAGATTTTTTGGTAACTCAAGGTTTTGTACATAAGGTCGAATCTATAAATAGC TATATTTCTTGCTGTGTTATCGGCGAACATGCCCATTTTTCACAACTATTCATCTGTCGCACTTGCGATGATGTTGTTGA GTGCCATGATACTAAAATTACAGAGCAGCTAACAAAGCATGCCGAGCAAATTGAATTTTCTGTTGAAAACCATATTGTTG AAACTCATGGTACCTGCAAAGCTTGTTTACATAGCGATAATCAAAATTAA
Upstream 100 bases:
>100_bases GACACTCTTTACCTTGATTATAATTCTCTAAATAGTGAAGTATAAATAAACATATCTATGATAAACTCGTCTACTTGTTC ATAAATAAGACATGTAAACA
Downstream 100 bases:
>100_bases TTTAAAGGATCCAACTCACGATGCGCGCTGAATTTGTAAACCCTTTCTTAGCTTCACTGATGAATGTACTTAAAACGATG GCTTCGATGGAGTTAAAACC
Product: zinc uptake regulation protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNSSQKQKVEQLCQQRGVRLTQQRLTVLELIVIHHGAISAYDLLEQLKKIEPQAKPPTIYRALDFLVTQGFVHKVESINS YISCCVIGEHAHFSQLFICRTCDDVVECHDTKITEQLTKHAEQIEFSVENHIVETHGTCKACLHSDNQN
Sequences:
>Translated_149_residues MNSSQKQKVEQLCQQRGVRLTQQRLTVLELIVIHHGAISAYDLLEQLKKIEPQAKPPTIYRALDFLVTQGFVHKVESINS YISCCVIGEHAHFSQLFICRTCDDVVECHDTKITEQLTKHAEQIEFSVENHIVETHGTCKACLHSDNQN >Mature_149_residues MNSSQKQKVEQLCQQRGVRLTQQRLTVLELIVIHHGAISAYDLLEQLKKIEPQAKPPTIYRALDFLVTQGFVHKVESINS YISCCVIGEHAHFSQLFICRTCDDVVECHDTKITEQLTKHAEQIEFSVENHIVETHGTCKACLHSDNQN
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=136, Percent_Identity=50, Blast_Score=142, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16998; Mature: 16998
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSQKQKVEQLCQQRGVRLTQQRLTVLELIVIHHGAISAYDLLEQLKKIEPQAKPPTIY CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHH RALDFLVTQGFVHKVESINSYISCCVIGEHAHFSQLFICRTCDDVVECHDTKITEQLTKH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH AEQIEFSVENHIVETHGTCKACLHSDNQN HHHHHHHHHHHHHHCCCHHHHHHCCCCCC >Mature Secondary Structure MNSSQKQKVEQLCQQRGVRLTQQRLTVLELIVIHHGAISAYDLLEQLKKIEPQAKPPTIY CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHH RALDFLVTQGFVHKVESINSYISCCVIGEHAHFSQLFICRTCDDVVECHDTKITEQLTKH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH AEQIEFSVENHIVETHGTCKACLHSDNQN HHHHHHHHHHHHHHCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]