Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209693994
Identifier: 209693994
GI number: 209693994
Start: 431463
End: 431678
Strand: Reverse
Name: 209693994
Synonym: VSAL_I0392
Alternate gene names: NA
Gene position: 431678-431463 (Counterclockwise)
Preceding gene: 209693997
Following gene: 209693991
Centisome position: 12.98
GC content: 41.2
Gene sequence:
>216_bases ATGAACCAACGAGATTATGGGGATGATGAGGGGCGTAGTGTATGTATGGCTGAATGTTTATCTCCAAATCCGGTTCCAGC TACAAATATAACTCAGATATATGTTGCCACTCAGGAAAATAAAGAGTCAGTTGAATCTATTTTAAGAGACTACCAACTCT CACCTCACGTAAATCTTAATGCTGCTATGTTTCCCAAACGAGGAAGCCGCGACTAG
Upstream 100 bases:
>100_bases TACTCATTTTAATACCATATGGATATATGGATATATGGTAAAGGCGAAATCTTCATTCTCGAAAACTTATCATTAACTAC TTACTATTAATTGGGAATTG
Downstream 100 bases:
>100_bases AAAGTTAATTAATTCAATGGGAGCCATTTTTCTTCATATAAACGAACAAAAGCTCCCTTAACTACGCCATTAGACGAGTT AAAATTATTAGATATAATAT
Product: phage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MNQRDYGDDEGRSVCMAECLSPNPVPATNITQIYVATQENKESVESILRDYQLSPHVNLNAAMFPKRGSRD
Sequences:
>Translated_71_residues MNQRDYGDDEGRSVCMAECLSPNPVPATNITQIYVATQENKESVESILRDYQLSPHVNLNAAMFPKRGSRD >Mature_71_residues MNQRDYGDDEGRSVCMAECLSPNPVPATNITQIYVATQENKESVESILRDYQLSPHVNLNAAMFPKRGSRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7973; Mature: 7973
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRDYGDDEGRSVCMAECLSPNPVPATNITQIYVATQENKESVESILRDYQLSPHVNLN CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCC AAMFPKRGSRD EEECCCCCCCC >Mature Secondary Structure MNQRDYGDDEGRSVCMAECLSPNPVPATNITQIYVATQENKESVESILRDYQLSPHVNLN CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCC AAMFPKRGSRD EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA