Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209693994

Identifier: 209693994

GI number: 209693994

Start: 431463

End: 431678

Strand: Reverse

Name: 209693994

Synonym: VSAL_I0392

Alternate gene names: NA

Gene position: 431678-431463 (Counterclockwise)

Preceding gene: 209693997

Following gene: 209693991

Centisome position: 12.98

GC content: 41.2

Gene sequence:

>216_bases
ATGAACCAACGAGATTATGGGGATGATGAGGGGCGTAGTGTATGTATGGCTGAATGTTTATCTCCAAATCCGGTTCCAGC
TACAAATATAACTCAGATATATGTTGCCACTCAGGAAAATAAAGAGTCAGTTGAATCTATTTTAAGAGACTACCAACTCT
CACCTCACGTAAATCTTAATGCTGCTATGTTTCCCAAACGAGGAAGCCGCGACTAG

Upstream 100 bases:

>100_bases
TACTCATTTTAATACCATATGGATATATGGATATATGGTAAAGGCGAAATCTTCATTCTCGAAAACTTATCATTAACTAC
TTACTATTAATTGGGAATTG

Downstream 100 bases:

>100_bases
AAAGTTAATTAATTCAATGGGAGCCATTTTTCTTCATATAAACGAACAAAAGCTCCCTTAACTACGCCATTAGACGAGTT
AAAATTATTAGATATAATAT

Product: phage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MNQRDYGDDEGRSVCMAECLSPNPVPATNITQIYVATQENKESVESILRDYQLSPHVNLNAAMFPKRGSRD

Sequences:

>Translated_71_residues
MNQRDYGDDEGRSVCMAECLSPNPVPATNITQIYVATQENKESVESILRDYQLSPHVNLNAAMFPKRGSRD
>Mature_71_residues
MNQRDYGDDEGRSVCMAECLSPNPVPATNITQIYVATQENKESVESILRDYQLSPHVNLNAAMFPKRGSRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7973; Mature: 7973

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRDYGDDEGRSVCMAECLSPNPVPATNITQIYVATQENKESVESILRDYQLSPHVNLN
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCC
AAMFPKRGSRD
EEECCCCCCCC
>Mature Secondary Structure
MNQRDYGDDEGRSVCMAECLSPNPVPATNITQIYVATQENKESVESILRDYQLSPHVNLN
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCC
AAMFPKRGSRD
EEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA