Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209693883
Identifier: 209693883
GI number: 209693883
Start: 322685
End: 322942
Strand: Reverse
Name: 209693883
Synonym: VSAL_I0275
Alternate gene names: NA
Gene position: 322942-322685 (Counterclockwise)
Preceding gene: 209693889
Following gene: 209693882
Centisome position: 9.71
GC content: 49.22
Gene sequence:
>258_bases ATGAAAAAGACTGCTATCGCTCTTATGCTAGCTATGACTGCTGGCTCTGCATTTGCCGCTGCTGAAGCAACAACTGCTGC TGCTTCTACAGGTTCTGCTGCTGGTACTGCTGCTGGTACTGCTCGCGCAACTACTGCTGCTGTTGGCGTTGCTGGTACTA CTGCTATCGCTGTAGGTGCTGTTGTTGCTGTTGCTGTTGCTGTTGCTGATTCAGGTTCTGATACTGCGACTTCAACGTCT ACATCTGTTACTCAATAA
Upstream 100 bases:
>100_bases GTATACTTTTCATGTGCGCGGGATCTGCGTATACATCGATGTAACGCTTTTTTATAAACATATAGTTATAAAAAAAACAT TTATTTAAAGGAAATTTTCC
Downstream 100 bases:
>100_bases GCCATAATAAGCTAAAAACAAAGCCATCAACACCGTGTTGATGGCTTTTTTTATATTTTTAATAAATTACCGAAAGTAGA ATTCATGAAAAATATTACTC
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MKKTAIALMLAMTAGSAFAAAEATTAAASTGSAAGTAAGTARATTAAVGVAGTTAIAVGAVVAVAVAVADSGSDTATSTS TSVTQ
Sequences:
>Translated_85_residues MKKTAIALMLAMTAGSAFAAAEATTAAASTGSAAGTAAGTARATTAAVGVAGTTAIAVGAVVAVAVAVADSGSDTATSTS TSVTQ >Mature_85_residues MKKTAIALMLAMTAGSAFAAAEATTAAASTGSAAGTAAGTARATTAAVGVAGTTAIAVGAVVAVAVAVADSGSDTATSTS TSVTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7636; Mature: 7636
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTAIALMLAMTAGSAFAAAEATTAAASTGSAAGTAAGTARATTAAVGVAGTTAIAVGA CCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHH VVAVAVAVADSGSDTATSTSTSVTQ HHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKTAIALMLAMTAGSAFAAAEATTAAASTGSAAGTAAGTARATTAAVGVAGTTAIAVGA CCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHH VVAVAVAVADSGSDTATSTSTSVTQ HHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA