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The map label for this gene is yjbH [H]

Identifier: 209693880

GI number: 209693880

Start: 318954

End: 321161

Strand: Reverse

Name: yjbH [H]

Synonym: VSAL_I0272

Alternate gene names: 209693880

Gene position: 321161-318954 (Counterclockwise)

Preceding gene: 209693881

Following gene: 209693872

Centisome position: 9.66

GC content: 40.22

Gene sequence:

>2208_bases
ATGCCGTATCCTAAATTTGCCTTATCTTTAATTGCAAGTGCGATTACTGCTACTTTTTCGACTTTTTCCTTGGCTGCAGA
AAGTAGTGAATATATTGAACCAATAACCTTTACCCCTTCCCAAACTGATTTTGGTGGCGTTGGTTTAATGCAAATGCCTT
CAGGACGTAATGCTGAAGAGGGGACATTCAGTTTTAATACTAGCTTCAATAATGAATATCACTTTTATAACCTCTCATTG
CAATTGATGCCGTGGCTTGAAACTACAATCCGTTACACTTTAACTCAAGACATGAAATACAGCAGCGACCCTAGTTTTAG
TGGAGATACCACTCATGCTGATAAAGGCATCGATTTCAAGGTTCGTCTATTAGAGGAGAGTGACTGGCTACCTGAAACCT
CTATCGGTGTGCGTGATTTTGGCGGTACTGGTTTATTTGATGGTGAATTTGTTGCGGCAACCAAGCGTTTTGGTAATCTC
GATGTCACCGTGGGCATGGGTTGGGGCTACCTTGGACAAAGTGGCAATATTACTAATCCATTTTGTAAAGCATCGGATAA
ATATTGCTCGCGTGAGTCTGACTTTAAAGGCAATGGCGGCAGTGTCGATTTTGAGCGTTGGTTTAAAGGCTCTGCGTCAC
TCTATGGTGGTTTGGAATATCAAACCCCTTTCCAACCGCTGCGCTTAAAACTTGAATATGATGGCAATGATTACAGTCAA
GATTATCCGGTAAAAGGTGGCGTCGCTGATATGACTCAGCACACCCCATGGAACTTTGGTGTTTTATATGGTTTAGGTGA
TTGGGGAGATATGCGTTTAAGTTATGAACGAGGGGATACTCTCACCTTTGGCTTTACGTTAACCACCAACTTTAACACAA
TGAAAGCTAATTGGCGTGATACCCCTGAAACCGTGTATCAGGCACCATCAGTTAATCATGTGGATGAAATAAACTGGAAT
TATATCGAACAAGAATTAGATAATAATGCCGGTTATTCTAACAGTAAATTTTACGTAAAAGGCAATGAATTAACGATCGT
TACTGGGCAAGAAAAGTATCGTAATAAAGATATTGCTCATCAAGAAGCGGCGGCAATTTTAGCAAGTAATACTCCTGAAT
ATATTCAAACTTATCGTATTATTGAAGAAAATAATTCCTTACTCACCACTGAGACCGTGATTGATGCTGAACGTTATAAA
GATGCAGCGCAATTTAATTACGTGGGCGCTAAAATTACAGATGCAACCGTCACTCAAGATATCTCTGAGACTGATTCAAT
CAATGATGATAATTTAAAACATGACTCATTTGACCGTTGGGATGTGAATATTTCTCCGTCTTTACGTCAATCAATTGGTG
GTGCTGAAGGTTTTTATCTGTATGAGATAGGCATTAAAGCAGGATCCTCTTATTGGCTTACTGATAACCTGCAAGCTTCT
GGATCTCTGTATTTAAACCTTATTGATAACTATGATAAATTTAATTACATCGCACCACCCGATGCGACCGAGGTTCCTCG
TGTTCGTACCATGTTTAGAGCTTATGCCACTGAAAGCGCTTTAAGACTGGAACGTTTACAGCTTACTTGGTTTGATGAAT
ATGCTGAAGGTCTATATGGGCAGACTTATGGTGGTTATTTAGAGAGTATGTTTGGTGGCGTTGGTACTGAGATATTATAC
CGCCCTATAAATAGCCGCTGGGCTGTTGGCCTTGATTATACGTACATTCAACAACGCTCTCCTGATAATTGGTTTGATTT
CTATCAAGATGACCGTCAATACAGCGAAGCCGATGGACGTTATTACAATGTTCGCTCTCAAGGAACAACTGGCCACTTAA
CCGGATATTACATGCCTCAATGGTCATTTTTAAAGAGTACGCTATTAAAGGTAAGTTATGGTGAGTTTTTAGCAGGCGAT
AAAGGCTATCGTGTAGATTTTTCTAAACAGTTTGATTCAGGTGTTATTGTTGGTGCTTATGCAAGTATGACTGATTTATC
TGCGGAGGAATTTGGTGAAGGCAGTTATACCAAAGGGTTTTACCTCTCTATTCCTTACGACATCATGACGGTTAAACCAA
GTAAAAATAGAGCGTACTTTGATTGGCAACCTTTGACTCGTGATGGCGGGCAGATGTTGTCGAAGGAAAATACGTTGTTT
GGCTTAACAGATGCAAGACAACCGTGGTATACGAAGAAAGGGCTTTAG

Upstream 100 bases:

>100_bases
CCGGAGCCACGATTTTTATTGGATTTAATGAGTTACCTGATTCATTGTCATCAATTCACCAAGATATCATTCAACTTTTA
CGTAATAAGGTAAATTAATC

Downstream 100 bases:

>100_bases
GACTATACGCTGCGCTGACTAGAACGCTTCGCTTCTATAAGATCTTAAGGTAAGAGCAGGGTTGAGGTTTCAGGTTTAAG
AGCGGACGCGGTTGGTTTGA

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 735; Mature: 734

Protein sequence:

>735_residues
MPYPKFALSLIASAITATFSTFSLAAESSEYIEPITFTPSQTDFGGVGLMQMPSGRNAEEGTFSFNTSFNNEYHFYNLSL
QLMPWLETTIRYTLTQDMKYSSDPSFSGDTTHADKGIDFKVRLLEESDWLPETSIGVRDFGGTGLFDGEFVAATKRFGNL
DVTVGMGWGYLGQSGNITNPFCKASDKYCSRESDFKGNGGSVDFERWFKGSASLYGGLEYQTPFQPLRLKLEYDGNDYSQ
DYPVKGGVADMTQHTPWNFGVLYGLGDWGDMRLSYERGDTLTFGFTLTTNFNTMKANWRDTPETVYQAPSVNHVDEINWN
YIEQELDNNAGYSNSKFYVKGNELTIVTGQEKYRNKDIAHQEAAAILASNTPEYIQTYRIIEENNSLLTTETVIDAERYK
DAAQFNYVGAKITDATVTQDISETDSINDDNLKHDSFDRWDVNISPSLRQSIGGAEGFYLYEIGIKAGSSYWLTDNLQAS
GSLYLNLIDNYDKFNYIAPPDATEVPRVRTMFRAYATESALRLERLQLTWFDEYAEGLYGQTYGGYLESMFGGVGTEILY
RPINSRWAVGLDYTYIQQRSPDNWFDFYQDDRQYSEADGRYYNVRSQGTTGHLTGYYMPQWSFLKSTLLKVSYGEFLAGD
KGYRVDFSKQFDSGVIVGAYASMTDLSAEEFGEGSYTKGFYLSIPYDIMTVKPSKNRAYFDWQPLTRDGGQMLSKENTLF
GLTDARQPWYTKKGL

Sequences:

>Translated_735_residues
MPYPKFALSLIASAITATFSTFSLAAESSEYIEPITFTPSQTDFGGVGLMQMPSGRNAEEGTFSFNTSFNNEYHFYNLSL
QLMPWLETTIRYTLTQDMKYSSDPSFSGDTTHADKGIDFKVRLLEESDWLPETSIGVRDFGGTGLFDGEFVAATKRFGNL
DVTVGMGWGYLGQSGNITNPFCKASDKYCSRESDFKGNGGSVDFERWFKGSASLYGGLEYQTPFQPLRLKLEYDGNDYSQ
DYPVKGGVADMTQHTPWNFGVLYGLGDWGDMRLSYERGDTLTFGFTLTTNFNTMKANWRDTPETVYQAPSVNHVDEINWN
YIEQELDNNAGYSNSKFYVKGNELTIVTGQEKYRNKDIAHQEAAAILASNTPEYIQTYRIIEENNSLLTTETVIDAERYK
DAAQFNYVGAKITDATVTQDISETDSINDDNLKHDSFDRWDVNISPSLRQSIGGAEGFYLYEIGIKAGSSYWLTDNLQAS
GSLYLNLIDNYDKFNYIAPPDATEVPRVRTMFRAYATESALRLERLQLTWFDEYAEGLYGQTYGGYLESMFGGVGTEILY
RPINSRWAVGLDYTYIQQRSPDNWFDFYQDDRQYSEADGRYYNVRSQGTTGHLTGYYMPQWSFLKSTLLKVSYGEFLAGD
KGYRVDFSKQFDSGVIVGAYASMTDLSAEEFGEGSYTKGFYLSIPYDIMTVKPSKNRAYFDWQPLTRDGGQMLSKENTLF
GLTDARQPWYTKKGL
>Mature_734_residues
PYPKFALSLIASAITATFSTFSLAAESSEYIEPITFTPSQTDFGGVGLMQMPSGRNAEEGTFSFNTSFNNEYHFYNLSLQ
LMPWLETTIRYTLTQDMKYSSDPSFSGDTTHADKGIDFKVRLLEESDWLPETSIGVRDFGGTGLFDGEFVAATKRFGNLD
VTVGMGWGYLGQSGNITNPFCKASDKYCSRESDFKGNGGSVDFERWFKGSASLYGGLEYQTPFQPLRLKLEYDGNDYSQD
YPVKGGVADMTQHTPWNFGVLYGLGDWGDMRLSYERGDTLTFGFTLTTNFNTMKANWRDTPETVYQAPSVNHVDEINWNY
IEQELDNNAGYSNSKFYVKGNELTIVTGQEKYRNKDIAHQEAAAILASNTPEYIQTYRIIEENNSLLTTETVIDAERYKD
AAQFNYVGAKITDATVTQDISETDSINDDNLKHDSFDRWDVNISPSLRQSIGGAEGFYLYEIGIKAGSSYWLTDNLQASG
SLYLNLIDNYDKFNYIAPPDATEVPRVRTMFRAYATESALRLERLQLTWFDEYAEGLYGQTYGGYLESMFGGVGTEILYR
PINSRWAVGLDYTYIQQRSPDNWFDFYQDDRQYSEADGRYYNVRSQGTTGHLTGYYMPQWSFLKSTLLKVSYGEFLAGDK
GYRVDFSKQFDSGVIVGAYASMTDLSAEEFGEGSYTKGFYLSIPYDIMTVKPSKNRAYFDWQPLTRDGGQMLSKENTLFG
LTDARQPWYTKKGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcA [H]

Homologues:

Organism=Escherichia coli, GI1790461, Length=725, Percent_Identity=43.448275862069, Blast_Score=592, Evalue=1e-170,
Organism=Escherichia coli, GI1787219, Length=716, Percent_Identity=41.8994413407821, Blast_Score=565, Evalue=1e-162,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010344 [H]

Pfam domain/function: PF06082 DUF940 [H]

EC number: NA

Molecular weight: Translated: 83252; Mature: 83120

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYPKFALSLIASAITATFSTFSLAAESSEYIEPITFTPSQTDFGGVGLMQMPSGRNAEE
CCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCC
GTFSFNTSFNNEYHFYNLSLQLMPWLETTIRYTLTQDMKYSSDPSFSGDTTHADKGIDFK
CEEEEECCCCCEEEEEEEEEEEECHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
VRLLEESDWLPETSIGVRDFGGTGLFDGEFVAATKRFGNLDVTVGMGWGYLGQSGNITNP
EEEEECCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCEEEEEECCCCEECCCCCCCCH
FCKASDKYCSRESDFKGNGGSVDFERWFKGSASLYGGLEYQTPFQPLRLKLEYDGNDYSQ
HHCCCCHHCCCCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCC
DYPVKGGVADMTQHTPWNFGVLYGLGDWGDMRLSYERGDTLTFGFTLTTNFNTMKANWRD
CCCCCCCHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEEEECCCEEECCCCC
TPETVYQAPSVNHVDEINWNYIEQELDNNAGYSNSKFYVKGNELTIVTGQEKYRNKDIAH
CHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCHHHCCCCCCH
QEAAAILASNTPEYIQTYRIIEENNSLLTTETVIDAERYKDAAQFNYVGAKITDATVTQD
HHHHHHEECCCHHHHHEEEEEECCCCEEEEHHHHHHHHHCCHHHEEECCCEEECCHHHCC
ISETDSINDDNLKHDSFDRWDVNISPSLRQSIGGAEGFYLYEIGIKAGSSYWLTDNLQAS
CHHHCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCEEEEEEEEECCCEEEEECCCCCC
GSLYLNLIDNYDKFNYIAPPDATEVPRVRTMFRAYATESALRLERLQLTWFDEYAEGLYG
CCEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEHHHHHCCCCC
QTYGGYLESMFGGVGTEILYRPINSRWAVGLDYTYIQQRSPDNWFDFYQDDRQYSEADGR
CCHHHHHHHHHCCCCCEEEEECCCCCEEEECCEEEEECCCCCCHHHHHHCCCHHHCCCCE
YYNVRSQGTTGHLTGYYMPQWSFLKSTLLKVSYGEFLAGDKGYRVDFSKQFDSGVIVGAY
EEEEECCCCCCEEEEEECCCHHHHHHHHHHEECCHHHCCCCCEEEEECCCCCCCEEEEEE
ASMTDLSAEEFGEGSYTKGFYLSIPYDIMTVKPSKNRAYFDWQPLTRDGGQMLSKENTLF
CCHHCCCHHHCCCCCCCCCEEEEECEEEEEECCCCCCEEEECCCCCCCCHHHHCCCCCEE
GLTDARQPWYTKKGL
EECCCCCCCCCCCCC
>Mature Secondary Structure 
PYPKFALSLIASAITATFSTFSLAAESSEYIEPITFTPSQTDFGGVGLMQMPSGRNAEE
CCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCC
GTFSFNTSFNNEYHFYNLSLQLMPWLETTIRYTLTQDMKYSSDPSFSGDTTHADKGIDFK
CEEEEECCCCCEEEEEEEEEEEECHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
VRLLEESDWLPETSIGVRDFGGTGLFDGEFVAATKRFGNLDVTVGMGWGYLGQSGNITNP
EEEEECCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCEEEEEECCCCEECCCCCCCCH
FCKASDKYCSRESDFKGNGGSVDFERWFKGSASLYGGLEYQTPFQPLRLKLEYDGNDYSQ
HHCCCCHHCCCCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCC
DYPVKGGVADMTQHTPWNFGVLYGLGDWGDMRLSYERGDTLTFGFTLTTNFNTMKANWRD
CCCCCCCHHHHHCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEEEEECCCEEECCCCC
TPETVYQAPSVNHVDEINWNYIEQELDNNAGYSNSKFYVKGNELTIVTGQEKYRNKDIAH
CHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCHHHCCCCCCH
QEAAAILASNTPEYIQTYRIIEENNSLLTTETVIDAERYKDAAQFNYVGAKITDATVTQD
HHHHHHEECCCHHHHHEEEEEECCCCEEEEHHHHHHHHHCCHHHEEECCCEEECCHHHCC
ISETDSINDDNLKHDSFDRWDVNISPSLRQSIGGAEGFYLYEIGIKAGSSYWLTDNLQAS
CHHHCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCEEEEEEEEECCCEEEEECCCCCC
GSLYLNLIDNYDKFNYIAPPDATEVPRVRTMFRAYATESALRLERLQLTWFDEYAEGLYG
CCEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEHHHHHCCCCC
QTYGGYLESMFGGVGTEILYRPINSRWAVGLDYTYIQQRSPDNWFDFYQDDRQYSEADGR
CCHHHHHHHHHCCCCCEEEEECCCCCEEEECCEEEEECCCCCCHHHHHHCCCHHHCCCCE
YYNVRSQGTTGHLTGYYMPQWSFLKSTLLKVSYGEFLAGDKGYRVDFSKQFDSGVIVGAY
EEEEECCCCCCEEEEEECCCHHHHHHHHHHEECCHHHCCCCCEEEEECCCCCCCEEEEEE
ASMTDLSAEEFGEGSYTKGFYLSIPYDIMTVKPSKNRAYFDWQPLTRDGGQMLSKENTLF
CCHHCCCHHHCCCCCCCCCEEEEECEEEEEECCCCCCEEEECCCCCCCCHHHHCCCCCEE
GLTDARQPWYTKKGL
EECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]