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The map label for this gene is yjbG [H]

Identifier: 209693881

GI number: 209693881

Start: 321164

End: 321928

Strand: Reverse

Name: yjbG [H]

Synonym: VSAL_I0273

Alternate gene names: 209693881

Gene position: 321928-321164 (Counterclockwise)

Preceding gene: 209693882

Following gene: 209693880

Centisome position: 9.68

GC content: 36.6

Gene sequence:

>765_bases
GTGACAATGCGTATTTTTGGTTTTCTCTTTTTATCACTCTGCTCTTTCTTTTCTTATGCTAGTGACTCTGCACTCTCTAT
TACATTAGTTAAAAACAGCGTGATTTTATCTTTTCCTCAAGCAACTCGATTAGACTCTGCACTACTAGAATCACTTAATT
ATAGTAATATCTATGCTTACCCTTTAGGCCTCATTCTTAGTGATGACGAGAAAAAAAATACTGTTATTCAACAGCAAGAG
AAACTGTCACAACAGCTAAGTAAGCTCGGTGAGTACTCTCCTTTTCTTTCATGGACCGAGTCAACTTACCAACTCAACTC
AAGCTTACTCATTAATCAATTGGCTCAGCTATCTTTTGTTTCTCGCCTCTTTATTCCATTAGATATCGATGAAATTAGAA
TAAAAAAAGAAAATAATCCACTGCTGAGTGGGCAGTTCTCGCTATTTGTGCCAGAGCGACCAACAACCATCACCGTTCTT
GGATTAACGTTATCTCCTAAACCACAAACTCTGTCATATATAGAGAATGGTAGTGTAAAAGATTATCTCCATAACGTTGA
TGTCAGCTCTCAAGCCAATACGTCTCAGGTTTATGTGATTCAACCTGATGGTGTCGTACAAATAGCGAGTAATAATCAAT
GGCAGAAAAATACGGTTTCAATTGCGCCCGGAGCCACGATTTTTATTGGATTTAATGAGTTACCTGATTCATTGTCATCA
ATTCACCAAGATATCATTCAACTTTTACGTAATAAGGTAAATTAA

Upstream 100 bases:

>100_bases
AGATAATACTGGCGAGGTAGTAAAAACTCGTCAATTTATTGGTCCAAACATGGCCACCATTGAAATGACTTTCCTTAAAC
CTTTTCGTTCTTAATTAGGA

Downstream 100 bases:

>100_bases
TCATGCCGTATCCTAAATTTGCCTTATCTTTAATTGCAAGTGCGATTACTGCTACTTTTTCGACTTTTTCCTTGGCTGCA
GAAAGTAGTGAATATATTGA

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTMRIFGFLFLSLCSFFSYASDSALSITLVKNSVILSFPQATRLDSALLESLNYSNIYAYPLGLILSDDEKKNTVIQQQE
KLSQQLSKLGEYSPFLSWTESTYQLNSSLLINQLAQLSFVSRLFIPLDIDEIRIKKENNPLLSGQFSLFVPERPTTITVL
GLTLSPKPQTLSYIENGSVKDYLHNVDVSSQANTSQVYVIQPDGVVQIASNNQWQKNTVSIAPGATIFIGFNELPDSLSS
IHQDIIQLLRNKVN

Sequences:

>Translated_254_residues
MTMRIFGFLFLSLCSFFSYASDSALSITLVKNSVILSFPQATRLDSALLESLNYSNIYAYPLGLILSDDEKKNTVIQQQE
KLSQQLSKLGEYSPFLSWTESTYQLNSSLLINQLAQLSFVSRLFIPLDIDEIRIKKENNPLLSGQFSLFVPERPTTITVL
GLTLSPKPQTLSYIENGSVKDYLHNVDVSSQANTSQVYVIQPDGVVQIASNNQWQKNTVSIAPGATIFIGFNELPDSLSS
IHQDIIQLLRNKVN
>Mature_253_residues
TMRIFGFLFLSLCSFFSYASDSALSITLVKNSVILSFPQATRLDSALLESLNYSNIYAYPLGLILSDDEKKNTVIQQQEK
LSQQLSKLGEYSPFLSWTESTYQLNSSLLINQLAQLSFVSRLFIPLDIDEIRIKKENNPLLSGQFSLFVPERPTTITVLG
LTLSPKPQTLSYIENGSVKDYLHNVDVSSQANTSQVYVIQPDGVVQIASNNQWQKNTVSIAPGATIFIGFNELPDSLSSI
HQDIIQLLRNKVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcB [H]

Homologues:

Organism=Escherichia coli, GI1790460, Length=196, Percent_Identity=29.5918367346939, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787220, Length=196, Percent_Identity=29.0816326530612, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010425 [H]

Pfam domain/function: PF06251 DUF1017 [H]

EC number: NA

Molecular weight: Translated: 28394; Mature: 28263

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMRIFGFLFLSLCSFFSYASDSALSITLVKNSVILSFPQATRLDSALLESLNYSNIYAY
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEEEECCCHHHHHHHHHHHCCCCEEEEE
PLGLILSDDEKKNTVIQQQEKLSQQLSKLGEYSPFLSWTESTYQLNSSLLINQLAQLSFV
EEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH
SRLFIPLDIDEIRIKKENNPLLSGQFSLFVPERPTTITVLGLTLSPKPQTLSYIENGSVK
HHHEEECCHHHEEEEECCCCEECCEEEEEECCCCCEEEEEEEEECCCCCHHHHHCCCCHH
DYLHNVDVSSQANTSQVYVIQPDGVVQIASNNQWQKNTVSIAPGATIFIGFNELPDSLSS
HHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCEEEECCCCEEEEECHHCCHHHHH
IHQDIIQLLRNKVN
HHHHHHHHHHHHCC
>Mature Secondary Structure 
TMRIFGFLFLSLCSFFSYASDSALSITLVKNSVILSFPQATRLDSALLESLNYSNIYAY
CCHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEEEECCCHHHHHHHHHHHCCCCEEEEE
PLGLILSDDEKKNTVIQQQEKLSQQLSKLGEYSPFLSWTESTYQLNSSLLINQLAQLSFV
EEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH
SRLFIPLDIDEIRIKKENNPLLSGQFSLFVPERPTTITVLGLTLSPKPQTLSYIENGSVK
HHHEEECCHHHEEEEECCCCEECCEEEEEECCCCCEEEEEEEEECCCCCHHHHHCCCCHH
DYLHNVDVSSQANTSQVYVIQPDGVVQIASNNQWQKNTVSIAPGATIFIGFNELPDSLSS
HHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCEEEECCCCEEEEECHHCCHHHHH
IHQDIIQLLRNKVN
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]