| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209693802
Identifier: 209693802
GI number: 209693802
Start: 227568
End: 229547
Strand: Reverse
Name: 209693802
Synonym: VSAL_I0187
Alternate gene names: NA
Gene position: 229547-227568 (Counterclockwise)
Preceding gene: 209693803
Following gene: 209693797
Centisome position: 6.9
GC content: 38.69
Gene sequence:
>1980_bases ATGAGCTTTCAACAAAACTTCAAACAACTCAGTAGAACCATATGGTTATCTGTTTTTATTGCCACAGCCATCATGTCTGT AGGTCGATTAGTCTTTCTTGCCAATATTGGTGACATGGCAGAGCTTACACATCGCGGCGGGGATCTATGGCGTGCTCTAT TTACAGGCTTACGCTTTGATTTAAAAATAGTGGTTATTGGTTTTGTCCCCTTATTGCTCATTGGTCTAGTTCTCGCTATT TTCCCAAAAGCTTATCGTTTCTTTGTAAGAATAATCCCTTGGTACGCAGGACTTATCTTTTTTATTGTTACTGGTTTCTC CATTGGTAATTACTATTACTACCTTACCTATGGCAATTACATTGATGTATTTATCTTTGGATTAGCGGACGATGATACCA AGGCTGTATTAGCCAATGCTTGGGCTGATTATCCTATTTTCTTGTCGTTTATTAGCAGTGTGATAGTCGCTTTCTTCTCT GCAATCATTGTACGTAGTGCAGTAAACAAAATGCAGCAATGGGAATGGAAATTACAACACAAAGGAATTATTTCTGTCTC TGTTTTTGTGATGATCTTGACGATATTCTTCTTTGCGCGAGGCACATTAGGTTCTCATCCATTAAAGCGTTATCACGCGC AAATTTCTGATTATAAAGTGCTTAACAGCATCACTCCGAATGGATTGATCGCACTTGAGTGGGCGAAAAGTGATTATAAA AAACAGAATAAATTTCACTCAGTAAATAAAGTGGATCTTGAAGCTCAGTTTACTAAGGTTGTTGGTAACTCAACTGGCCA GTTTACGACGCCTTATAATGCTTATTTAGCTGAGAACAAACCTCATGTTGTGATGGCATTAATGGAAGGAATGGGAACTA ATGTTCTTGTTGAAGATAACTATCCAGAAAATGACTTATTAGGAGCATTGCGACCAACCTTTGAGTCTGGTTTTGTTTTT AAGCGATTTTTAGCTGAGACTCCAGCGACAATTAATACGCTGGTGAATATGTTAGGGCAAAGTAATGTTCCGACGATCAG CCATTCTTCAGCTCAAAAAGTAGAAGTCGCAGCAGCGGCAGCACGTCCTTATAAAGCTGCAGGGTATAAAACGATTTTTA TTACTGCTACCAATGGCATGTGGCGTAATGTTGCTAATTATTTACCATCACAAGGCTTCGATGAAATATTAGATGAAAAT GCGATTTTAAAAGCGTTTCCTGAAGCAGAAGCGTTTCGTGGTGAATGGGGATTATCGGATGAATACGCTTTCAAACTAGC AGAAAAAGAGCTAAAAGAAGCGACTCAGCCACTTATGATTTACATCTTAACCATTACAAACCACACTCCTTATGAAGTAC CAGAAAATTATGATGTAAAACCACTTAAGGTGAGCGAGCGTTTATTAGAAAGAATGGGGTCAGGAGAAGAAGAAGCGACG CGATTACTTGAAACTTATCAGTATGCCAATAACGCATTAGGTGAATTTATTATGGATATAAAACAGTCACCACTAGGAGA ATCAACCCTCATAGCCGCGACGGGTGATCATAAATTAAGAGGGTTTACGATGCAGTACCCTGATGATTTAGCGATCATCA ATGCTGTGCCATTTTATCTGTATGTGCCTGAAAAAATACAACACCAAGTGCCATATATCTATAATGAAAAAGTTGTAGGA TCGCACAAAGATATCTTCCCAACCTTGTATGCATTCAGCTTGTCAGAAGCGACATATTACAGCTTAGGTGGAGAGAATAT GTTGAGCACAACAGACACAAACCGATTTGGTTATAATCCTGAAATGACGTTGATAGAGCAGGGGATATATATGAATAAGC AGCCAGATCGATTATATCCATGGGTATCAGAGGTGGCGATAACTCCTGAATCGATTTCAAATAACGGCAAGCTTTTAGAT AAGGATTACCACACATTGCAAACCTTATACATCAATAGCCAAGTAAAAGGCGTTCATTAA
Upstream 100 bases:
>100_bases AGAACAGAAAATAGGGCAAAGAAATACGTTTTGGTGTGAAAAGTGCCAACCTATTAATCAGTAAAATAGTGATCAGAATA CCAATAGAAAAGAGATATAG
Downstream 100 bases:
>100_bases TTGTAATCATAGGCCACTTATTTGAGTGGCCTTTGTTTGGGCATTAAACTGGTGACTTTACTTTATGTATTAATGCTTGA TTTACCACAGAAGGAACAAA
Product: membrane protein
Products: NA
Alternate protein names: Phosphoglycerol Transferase; LOW QUALITY PROTEIN Sulfatase Domain-Containing Protein; Alkaline Phosphatase; Integral Membrane Protein; Sulfatase Family Protein; Arylsulfatase; Phosphoglycerol Transferase-Like Protein; Phosphoglycerol Transferase Related Protein; Membrane Attached Sulfatase; Sulfatase Protein; Sulfatase Domain-Containing Protein; Alkaline Phosphatase Superfamily Protein; Membrane Associated Sulfatase; Sulfatase Family; Sulfatase/Phosphoglycerol Transferase; Phosphoglycerol Transferase-Related Protein; Membrane Sulfatase
Number of amino acids: Translated: 659; Mature: 658
Protein sequence:
>659_residues MSFQQNFKQLSRTIWLSVFIATAIMSVGRLVFLANIGDMAELTHRGGDLWRALFTGLRFDLKIVVIGFVPLLLIGLVLAI FPKAYRFFVRIIPWYAGLIFFIVTGFSIGNYYYYLTYGNYIDVFIFGLADDDTKAVLANAWADYPIFLSFISSVIVAFFS AIIVRSAVNKMQQWEWKLQHKGIISVSVFVMILTIFFFARGTLGSHPLKRYHAQISDYKVLNSITPNGLIALEWAKSDYK KQNKFHSVNKVDLEAQFTKVVGNSTGQFTTPYNAYLAENKPHVVMALMEGMGTNVLVEDNYPENDLLGALRPTFESGFVF KRFLAETPATINTLVNMLGQSNVPTISHSSAQKVEVAAAAARPYKAAGYKTIFITATNGMWRNVANYLPSQGFDEILDEN AILKAFPEAEAFRGEWGLSDEYAFKLAEKELKEATQPLMIYILTITNHTPYEVPENYDVKPLKVSERLLERMGSGEEEAT RLLETYQYANNALGEFIMDIKQSPLGESTLIAATGDHKLRGFTMQYPDDLAIINAVPFYLYVPEKIQHQVPYIYNEKVVG SHKDIFPTLYAFSLSEATYYSLGGENMLSTTDTNRFGYNPEMTLIEQGIYMNKQPDRLYPWVSEVAITPESISNNGKLLD KDYHTLQTLYINSQVKGVH
Sequences:
>Translated_659_residues MSFQQNFKQLSRTIWLSVFIATAIMSVGRLVFLANIGDMAELTHRGGDLWRALFTGLRFDLKIVVIGFVPLLLIGLVLAI FPKAYRFFVRIIPWYAGLIFFIVTGFSIGNYYYYLTYGNYIDVFIFGLADDDTKAVLANAWADYPIFLSFISSVIVAFFS AIIVRSAVNKMQQWEWKLQHKGIISVSVFVMILTIFFFARGTLGSHPLKRYHAQISDYKVLNSITPNGLIALEWAKSDYK KQNKFHSVNKVDLEAQFTKVVGNSTGQFTTPYNAYLAENKPHVVMALMEGMGTNVLVEDNYPENDLLGALRPTFESGFVF KRFLAETPATINTLVNMLGQSNVPTISHSSAQKVEVAAAAARPYKAAGYKTIFITATNGMWRNVANYLPSQGFDEILDEN AILKAFPEAEAFRGEWGLSDEYAFKLAEKELKEATQPLMIYILTITNHTPYEVPENYDVKPLKVSERLLERMGSGEEEAT RLLETYQYANNALGEFIMDIKQSPLGESTLIAATGDHKLRGFTMQYPDDLAIINAVPFYLYVPEKIQHQVPYIYNEKVVG SHKDIFPTLYAFSLSEATYYSLGGENMLSTTDTNRFGYNPEMTLIEQGIYMNKQPDRLYPWVSEVAITPESISNNGKLLD KDYHTLQTLYINSQVKGVH >Mature_658_residues SFQQNFKQLSRTIWLSVFIATAIMSVGRLVFLANIGDMAELTHRGGDLWRALFTGLRFDLKIVVIGFVPLLLIGLVLAIF PKAYRFFVRIIPWYAGLIFFIVTGFSIGNYYYYLTYGNYIDVFIFGLADDDTKAVLANAWADYPIFLSFISSVIVAFFSA IIVRSAVNKMQQWEWKLQHKGIISVSVFVMILTIFFFARGTLGSHPLKRYHAQISDYKVLNSITPNGLIALEWAKSDYKK QNKFHSVNKVDLEAQFTKVVGNSTGQFTTPYNAYLAENKPHVVMALMEGMGTNVLVEDNYPENDLLGALRPTFESGFVFK RFLAETPATINTLVNMLGQSNVPTISHSSAQKVEVAAAAARPYKAAGYKTIFITATNGMWRNVANYLPSQGFDEILDENA ILKAFPEAEAFRGEWGLSDEYAFKLAEKELKEATQPLMIYILTITNHTPYEVPENYDVKPLKVSERLLERMGSGEEEATR LLETYQYANNALGEFIMDIKQSPLGESTLIAATGDHKLRGFTMQYPDDLAIINAVPFYLYVPEKIQHQVPYIYNEKVVGS HKDIFPTLYAFSLSEATYYSLGGENMLSTTDTNRFGYNPEMTLIEQGIYMNKQPDRLYPWVSEVAITPESISNNGKLLDK DYHTLQTLYINSQVKGVH
Specific function: Unknown
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74494; Mature: 74363
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQQNFKQLSRTIWLSVFIATAIMSVGRLVFLANIGDMAELTHRGGDLWRALFTGLRFD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCHHHHHHHHHCCCHH LKIVVIGFVPLLLIGLVLAIFPKAYRFFVRIIPWYAGLIFFIVTGFSIGNYYYYLTYGNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEEEEEECCE IDVFIFGLADDDTKAVLANAWADYPIFLSFISSVIVAFFSAIIVRSAVNKMQQWEWKLQH EEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGIISVSVFVMILTIFFFARGTLGSHPLKRYHAQISDYKVLNSITPNGLIALEWAKSDYK CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHH KQNKFHSVNKVDLEAQFTKVVGNSTGQFTTPYNAYLAENKPHVVMALMEGMGTNVLVEDN HHHHHCCCCEEEHHHHHHHHHCCCCCCEECCCHHEECCCCCCEEHEEHHCCCCEEEEECC YPENDLLGALRPTFESGFVFKRFLAETPATINTLVNMLGQSNVPTISHSSAQKVEVAAAA CCCHHHHHHHCCCHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH ARPYKAAGYKTIFITATNGMWRNVANYLPSQGFDEILDENAILKAFPEAEAFRGEWGLSD CCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHHHCCCCHHHHCCCHHHHCCCCCCCH EYAFKLAEKELKEATQPLMIYILTITNHTPYEVPENYDVKPLKVSERLLERMGSGEEEAT HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH RLLETYQYANNALGEFIMDIKQSPLGESTLIAATGDHKLRGFTMQYPDDLAIINAVPFYL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCEEEHCCCCEEE YVPEKIQHQVPYIYNEKVVGSHKDIFPTLYAFSLSEATYYSLGGENMLSTTDTNRFGYNP ECCHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCCCC EMTLIEQGIYMNKQPDRLYPWVSEVAITPESISNNGKLLDKDYHTLQTLYINSQVKGVH CHHHEECCCCCCCCCCHHCCCHHHHEECHHHCCCCCCEECCHHHEEEEEEECCCCCCCC >Mature Secondary Structure SFQQNFKQLSRTIWLSVFIATAIMSVGRLVFLANIGDMAELTHRGGDLWRALFTGLRFD CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHCCHHHHHHHHHCCCHH LKIVVIGFVPLLLIGLVLAIFPKAYRFFVRIIPWYAGLIFFIVTGFSIGNYYYYLTYGNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCEEEEEEECCE IDVFIFGLADDDTKAVLANAWADYPIFLSFISSVIVAFFSAIIVRSAVNKMQQWEWKLQH EEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGIISVSVFVMILTIFFFARGTLGSHPLKRYHAQISDYKVLNSITPNGLIALEWAKSDYK CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHH KQNKFHSVNKVDLEAQFTKVVGNSTGQFTTPYNAYLAENKPHVVMALMEGMGTNVLVEDN HHHHHCCCCEEEHHHHHHHHHCCCCCCEECCCHHEECCCCCCEEHEEHHCCCCEEEEECC YPENDLLGALRPTFESGFVFKRFLAETPATINTLVNMLGQSNVPTISHSSAQKVEVAAAA CCCHHHHHHHCCCHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH ARPYKAAGYKTIFITATNGMWRNVANYLPSQGFDEILDENAILKAFPEAEAFRGEWGLSD CCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHHHCCCCHHHHCCCHHHHCCCCCCCH EYAFKLAEKELKEATQPLMIYILTITNHTPYEVPENYDVKPLKVSERLLERMGSGEEEAT HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH RLLETYQYANNALGEFIMDIKQSPLGESTLIAATGDHKLRGFTMQYPDDLAIINAVPFYL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCEEEHCCCCEEE YVPEKIQHQVPYIYNEKVVGSHKDIFPTLYAFSLSEATYYSLGGENMLSTTDTNRFGYNP ECCHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCCCC EMTLIEQGIYMNKQPDRLYPWVSEVAITPESISNNGKLLDKDYHTLQTLYINSQVKGVH CHHHEECCCCCCCCCCHHCCCHHHHEECHHHCCCCCCEECCHHHEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA