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The map label for this gene is wavC [H]

Identifier: 209693797

GI number: 209693797

Start: 223080

End: 223784

Strand: Reverse

Name: wavC [H]

Synonym: VSAL_I0182

Alternate gene names: 209693797

Gene position: 223784-223080 (Counterclockwise)

Preceding gene: 209693802

Following gene: 209693796

Centisome position: 6.73

GC content: 36.74

Gene sequence:

>705_bases
ATGCAAAAAATCCAAACAACAAAACAAACCATTTGGTATGACGACTCAATTCTTAGTGACTCACCAGAACAATGTTGTGA
TCCCGACTATTGGCAGCAACAAGATAAGGTAATTGGCTCAGCTCAAGGGCGAGGAACAACTTGGTTTGTGGCATTAGATA
CTATGGATGCGGCACTGCGTCATTATCGCCGTGGTGGCTTGTTTGGAAAGCTAATTAAAGATCATTATATTTTTACTGGT
TGGGAAAAAACACGCAGTTATCAAGAATTTCAGCTTCTCAATATTTTAATAGAAGCGGGTGTTAATGTACCAAAGCCCAT
TGCAGCTCGTTCGATTAAACGCACTTTTTGCTACCAAGCCGATTTGTTAAGCGAGAAGATCCCTCATGCACGAGATTTAG
TGGCTATTTTACAAGAAGAATCACTATCTAAAGAAATATATCAAAAAATAGGGGCTGAGATTGGTAAGATGCACACCGCA
CAAGTGAATCATACTGATTTAAATATTCATAATATTTTAATTGATGATAAAGAGAATGTTTGGATAATCGACTTTGATAA
ATGCTATCAACAAGAAGGTAGCGATTGGAAAGAAAGTAATTTATCTCGTTTGAATCGATCTTTTCATAAAGAAGTAAACA
AAAGACAGATAAAATGGTCGGAAGATGAGTGGCAACACTTGTTTTCGGGCTACAACACAATTTAA

Upstream 100 bases:

>100_bases
TTAGAGGCATTTCGCTCTTGAACTTATAGTTTCTAGAAGCGAAGCGGTCTAGTTAGCGCAGCGTATAATCTCTAATGTTT
AATATTGGAGTACCTGTAAC

Downstream 100 bases:

>100_bases
CCCATTTTTATTCACCCATTACAGCTGGATTCATGATTTTGAATACATTGACATTTAAACAAAAACTTCACAGTCACGGT
TGGTTTATTTTAATCAACAG

Product: 3-deoxy-D-manno-octulosonic-acid kinase

Products: NA

Alternate protein names: KDO kinase [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MQKIQTTKQTIWYDDSILSDSPEQCCDPDYWQQQDKVIGSAQGRGTTWFVALDTMDAALRHYRRGGLFGKLIKDHYIFTG
WEKTRSYQEFQLLNILIEAGVNVPKPIAARSIKRTFCYQADLLSEKIPHARDLVAILQEESLSKEIYQKIGAEIGKMHTA
QVNHTDLNIHNILIDDKENVWIIDFDKCYQQEGSDWKESNLSRLNRSFHKEVNKRQIKWSEDEWQHLFSGYNTI

Sequences:

>Translated_234_residues
MQKIQTTKQTIWYDDSILSDSPEQCCDPDYWQQQDKVIGSAQGRGTTWFVALDTMDAALRHYRRGGLFGKLIKDHYIFTG
WEKTRSYQEFQLLNILIEAGVNVPKPIAARSIKRTFCYQADLLSEKIPHARDLVAILQEESLSKEIYQKIGAEIGKMHTA
QVNHTDLNIHNILIDDKENVWIIDFDKCYQQEGSDWKESNLSRLNRSFHKEVNKRQIKWSEDEWQHLFSGYNTI
>Mature_234_residues
MQKIQTTKQTIWYDDSILSDSPEQCCDPDYWQQQDKVIGSAQGRGTTWFVALDTMDAALRHYRRGGLFGKLIKDHYIFTG
WEKTRSYQEFQLLNILIEAGVNVPKPIAARSIKRTFCYQADLLSEKIPHARDLVAILQEESLSKEIYQKIGAEIGKMHTA
QVNHTDLNIHNILIDDKENVWIIDFDKCYQQEGSDWKESNLSRLNRSFHKEVNKRQIKWSEDEWQHLFSGYNTI

Specific function: ATP-dependent phosphorylation of 3-deoxy-D-manno- octulosonic acid at the 4-OH position [H]

COG id: COG0515

COG function: function code RTKL; Serine/threonine protein kinase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein kinase superfamily. KdkA/rfaP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022826
- InterPro:   IPR011009
- InterPro:   IPR010440
- InterPro:   IPR000719 [H]

Pfam domain/function: PF06293 Kdo [H]

EC number: NA

Molecular weight: Translated: 27400; Mature: 27400

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIQTTKQTIWYDDSILSDSPEQCCDPDYWQQQDKVIGSAQGRGTTWFVALDTMDAALR
CCCCHHHHHHEEECCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHH
HYRRGGLFGKLIKDHYIFTGWEKTRSYQEFQLLNILIEAGVNVPKPIAARSIKRTFCYQA
HHHHCCHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
DLLSEKIPHARDLVAILQEESLSKEIYQKIGAEIGKMHTAQVNHTDLNIHNILIDDKENV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCE
WIIDFDKCYQQEGSDWKESNLSRLNRSFHKEVNKRQIKWSEDEWQHLFSGYNTI
EEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MQKIQTTKQTIWYDDSILSDSPEQCCDPDYWQQQDKVIGSAQGRGTTWFVALDTMDAALR
CCCCHHHHHHEEECCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHH
HYRRGGLFGKLIKDHYIFTGWEKTRSYQEFQLLNILIEAGVNVPKPIAARSIKRTFCYQA
HHHHCCHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
DLLSEKIPHARDLVAILQEESLSKEIYQKIGAEIGKMHTAQVNHTDLNIHNILIDDKENV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCE
WIIDFDKCYQQEGSDWKESNLSRLNRSFHKEVNKRQIKWSEDEWQHLFSGYNTI
EEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]