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The map label for this gene is epsN [H]

Identifier: 209693788

GI number: 209693788

Start: 211370

End: 212515

Strand: Reverse

Name: epsN [H]

Synonym: VSAL_I0171

Alternate gene names: 209693788

Gene position: 212515-211370 (Counterclockwise)

Preceding gene: 209693789

Following gene: 209693787

Centisome position: 6.39

GC content: 40.75

Gene sequence:

>1146_bases
ATGAACAAAACACCACTAGTTGAGTTTGTGCGAGATATTTATCAAACTAATGACTTTATTCCACTGCATGCCCCAACGTT
TGATGGCAATGAGCAGAAGTATGTTCTAGAAACCATTCAAAGTACTTTCGTATCTAGCGTTGGTAAATTTGTAGATGAAT
TTGAACAGAAAATAGAATCCTATACAGGAACAGCAAAAGCGGTTGCGACGGTTAATGGAACAGCTGCGCTTCATGCTGCC
TTGTATATGGCAGGCGTTCAGCATGGTGATTTTGTTATTACTCAAGCGCTTACTTTTGTTGCAACCTGTAATGCATTGCA
TCACATGGGTGCAGAACCAATCTTTGTCGATGTATCACCTGTAAGCTTAGGGCTTTGTCCTAAAGCGATGGATGAGTATT
TAACTCAACATGCACAAGTTACGGAAACGGGGTGTATTCATTCACAAACTAAACGTCCAATTCGTGCGGTTGTACCAATG
CATACCTTTGGACACCCTGTCGAATTAGATGAATTGATTGCCGTTTGCCATAAATGGAATATTACCTTAGTTGAAGATGC
AGCTGAAAGCTTAGGCTCTTTTTACAAAGGTAAACATACGGGTACGTTAGGCGATTTTGGTGCGGTTAGTTTTAATGGTA
ATAAGATCATTACAACTGGTGGCGGCGGTATGGTGCTATGCAAAACGGCAGAGCTTGGAGCTCGAACAAAACACGTTACT
ACGACAGCAAAAGTACCACATCCTTATGAGTTCTATCATGATGAAGCCGGTTTTAACTATCGAATGCCGAACCTTAATGC
AGCGTTAGGTTGTGCTCAGATGGAAGTATTAGAACCATACTTAGCTCAGAAGCGAGTATTGGCAAATCGTTATCAAGATT
TTTTTGCTGAAAGTGATTTCCAATTTGTGTCTGAGCCTGAATATGCACAGTCAAATTATTGGTTAAATGCAGTGATTTGT
CCGTCAGTAGACGCGCGTAATGATATTTTAAAACAAACCAATGAATCAGGTGTAATGACTCGCCCAATCTGGCAATTGAT
GCACCGTTTGCCAATGTTTAAAGAGGCACCTCGTGGTGATTTAACTCAGTCTGAATATATTGAAGCACACTTGATTAATT
TACCTAGCACGCCTGTTGCACTGTAG

Upstream 100 bases:

>100_bases
TCGTACAATTATTCTTTACCATGATCCCTGATTTTGGGCACAAAGAAACAGGCAAGTACCTTGATAGCAAAATGTAATTA
AGAAAGTGGAGACCAAAGTA

Downstream 100 bases:

>100_bases
CTGTAATGAAAGACAACAAAGAGGTAATCGGTTTATTATGAGTCAGCTATTCATGAATAAGAAAGTAGCCGTTTTTACAG
GGACAAGAGCAGAGTATGGC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNKTPLVEFVRDIYQTNDFIPLHAPTFDGNEQKYVLETIQSTFVSSVGKFVDEFEQKIESYTGTAKAVATVNGTAALHAA
LYMAGVQHGDFVITQALTFVATCNALHHMGAEPIFVDVSPVSLGLCPKAMDEYLTQHAQVTETGCIHSQTKRPIRAVVPM
HTFGHPVELDELIAVCHKWNITLVEDAAESLGSFYKGKHTGTLGDFGAVSFNGNKIITTGGGGMVLCKTAELGARTKHVT
TTAKVPHPYEFYHDEAGFNYRMPNLNAALGCAQMEVLEPYLAQKRVLANRYQDFFAESDFQFVSEPEYAQSNYWLNAVIC
PSVDARNDILKQTNESGVMTRPIWQLMHRLPMFKEAPRGDLTQSEYIEAHLINLPSTPVAL

Sequences:

>Translated_381_residues
MNKTPLVEFVRDIYQTNDFIPLHAPTFDGNEQKYVLETIQSTFVSSVGKFVDEFEQKIESYTGTAKAVATVNGTAALHAA
LYMAGVQHGDFVITQALTFVATCNALHHMGAEPIFVDVSPVSLGLCPKAMDEYLTQHAQVTETGCIHSQTKRPIRAVVPM
HTFGHPVELDELIAVCHKWNITLVEDAAESLGSFYKGKHTGTLGDFGAVSFNGNKIITTGGGGMVLCKTAELGARTKHVT
TTAKVPHPYEFYHDEAGFNYRMPNLNAALGCAQMEVLEPYLAQKRVLANRYQDFFAESDFQFVSEPEYAQSNYWLNAVIC
PSVDARNDILKQTNESGVMTRPIWQLMHRLPMFKEAPRGDLTQSEYIEAHLINLPSTPVAL
>Mature_381_residues
MNKTPLVEFVRDIYQTNDFIPLHAPTFDGNEQKYVLETIQSTFVSSVGKFVDEFEQKIESYTGTAKAVATVNGTAALHAA
LYMAGVQHGDFVITQALTFVATCNALHHMGAEPIFVDVSPVSLGLCPKAMDEYLTQHAQVTETGCIHSQTKRPIRAVVPM
HTFGHPVELDELIAVCHKWNITLVEDAAESLGSFYKGKHTGTLGDFGAVSFNGNKIITTGGGGMVLCKTAELGARTKHVT
TTAKVPHPYEFYHDEAGFNYRMPNLNAALGCAQMEVLEPYLAQKRVLANRYQDFFAESDFQFVSEPEYAQSNYWLNAVIC
PSVDARNDILKQTNESGVMTRPIWQLMHRLPMFKEAPRGDLTQSEYIEAHLINLPSTPVAL

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=381, Percent_Identity=26.246719160105, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI2367285, Length=347, Percent_Identity=29.3948126801153, Blast_Score=128, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR002129
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42182; Mature: 42182

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTPLVEFVRDIYQTNDFIPLHAPTFDGNEQKYVLETIQSTFVSSVGKFVDEFEQKIES
CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTGTAKAVATVNGTAALHAALYMAGVQHGDFVITQALTFVATCNALHHMGAEPIFVDVSP
HCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
VSLGLCPKAMDEYLTQHAQVTETGCIHSQTKRPIRAVVPMHTFGHPVELDELIAVCHKWN
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCHHHCCCCCCHHHHHHHHHHCC
ITLVEDAAESLGSFYKGKHTGTLGDFGAVSFNGNKIITTGGGGMVLCKTAELGARTKHVT
EEEHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEHHCCCCCCEEE
TTAKVPHPYEFYHDEAGFNYRMPNLNAALGCAQMEVLEPYLAQKRVLANRYQDFFAESDF
EECCCCCCHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QFVSEPEYAQSNYWLNAVICPSVDARNDILKQTNESGVMTRPIWQLMHRLPMFKEAPRGD
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEHHHHHHHHHCCCHHCCCCCC
LTQSEYIEAHLINLPSTPVAL
CCHHHHHHEEEEECCCCCCCC
>Mature Secondary Structure
MNKTPLVEFVRDIYQTNDFIPLHAPTFDGNEQKYVLETIQSTFVSSVGKFVDEFEQKIES
CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTGTAKAVATVNGTAALHAALYMAGVQHGDFVITQALTFVATCNALHHMGAEPIFVDVSP
HCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
VSLGLCPKAMDEYLTQHAQVTETGCIHSQTKRPIRAVVPMHTFGHPVELDELIAVCHKWN
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCHHHCCCCCCHHHHHHHHHHCC
ITLVEDAAESLGSFYKGKHTGTLGDFGAVSFNGNKIITTGGGGMVLCKTAELGARTKHVT
EEEHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEHHCCCCCCEEE
TTAKVPHPYEFYHDEAGFNYRMPNLNAALGCAQMEVLEPYLAQKRVLANRYQDFFAESDF
EECCCCCCHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QFVSEPEYAQSNYWLNAVICPSVDARNDILKQTNESGVMTRPIWQLMHRLPMFKEAPRGD
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEHHHHHHHHHCCCHHCCCCCC
LTQSEYIEAHLINLPSTPVAL
CCHHHHHHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]