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The map label for this gene is 209693789

Identifier: 209693789

GI number: 209693789

Start: 212539

End: 213729

Strand: Reverse

Name: 209693789

Synonym: VSAL_I0172

Alternate gene names: NA

Gene position: 213729-212539 (Counterclockwise)

Preceding gene: 209693790

Following gene: 209693788

Centisome position: 6.43

GC content: 37.87

Gene sequence:

>1191_bases
ATGAATCCAATTCTATCCCTTATCGGTCGTACCGATGCCTTATTTACACAAGATATTGCTAGCCATGAAGCTGAACTATC
TCGTATCGTCTCTCAATCTCGCTTCCTTGTTCTCGGTGGTGCAGGATCAATCGGCCAAGCGGTGACAAAAGAGATCTTCA
AGCGTAACCCTCAAAAGCTACATGTTGTTGATATCAGTGAAAACAACATGGTTGAGTTAGTGCGTGATATTCGTAGCTCA
TTTGGTTACATCAATGGTGACTTTCAAACTTTTGCATTAGATATCGGTTCTATTGAATATGATGCGTTTATCAAAGCCGA
TGGCCAGTATGATTATGTATTGAATTTATCTGCACTTAAGCATGTACGTAGTGAAAAAGATCCATTCACTTTGATGCGTA
TGATTGATGTAAACGTGTTTAATACTGACAAAACAATTCAACAGTCAATTGATGCTGGCGCGAAAAAATATTTCTGTGTC
TCTACCGATAAAGCAGCAAATCCTGTCAACATGATGGGTGCTTCAAAGCGCATTATGGAAATGTTCTTAATGCGTAAGAG
TGAAAAAATGGCTATCTCTACCGCTCGTTTTGCGAATGTGGCTTTTTCTGACGGCTCTTTGCTTCATGGTTTTAATCAGC
GAATTCAAAAGAACCAACCGATTGTAGCGCCAAATGACATCAAACGTTATTTCGTTACTCCACAAGAGTCAGGTGAACTG
TGTTTAATGTCGTGTATTTTTGGTGAAAACCGAGACATCTTCTTCCCTAAATTAAGCGAAGCACTGCATTTAATTTCGTT
CGCAGATATTGCGGTAAAATATCTTAAGCAAATTGGTTATGAACCTCATTTATGTGACAGCGAAGATGAAGCTCGCGAAT
TAGCTAAAACATTACCTGCTCAAGGTAAGTGGCCATGTTTATTTACCTCTAGTGATACTACTGGTGAAAAAGATTTTGAA
GAATTTTTCACTGATAAAGAAACACTAGATATGGCGCGTTTTGATAATTTAGGCATCATTAAAAATGATCCACTTTATCA
ACAAGAGTTACTTGCGCTATTTGAACAAAAAATAGGTCAAATGAAGTCAGATCGTCAGTGGACTAAAGAAGAAATCGTAC
AATTATTCTTTACCATGATCCCTGATTTTGGGCACAAAGAAACAGGCAAGTACCTTGATAGCAAAATGTAA

Upstream 100 bases:

>100_bases
TGAGTAATTATTTAAATGCAGGAAGTGTAGATTATCTAATTCGATTAAATATCTCTATTCCTTTCCCCTATAGTATGAAA
ATTGTATAAAAGTGGTAACC

Downstream 100 bases:

>100_bases
TTAAGAAAGTGGAGACCAAAGTAATGAACAAAACACCACTAGTTGAGTTTGTGCGAGATATTTATCAAACTAATGACTTT
ATTCCACTGCATGCCCCAAC

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNPILSLIGRTDALFTQDIASHEAELSRIVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSS
FGYINGDFQTFALDIGSIEYDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCV
STDKAANPVNMMGASKRIMEMFLMRKSEKMAISTARFANVAFSDGSLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESGEL
CLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQIGYEPHLCDSEDEARELAKTLPAQGKWPCLFTSSDTTGEKDFE
EFFTDKETLDMARFDNLGIIKNDPLYQQELLALFEQKIGQMKSDRQWTKEEIVQLFFTMIPDFGHKETGKYLDSKM

Sequences:

>Translated_396_residues
MNPILSLIGRTDALFTQDIASHEAELSRIVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSS
FGYINGDFQTFALDIGSIEYDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCV
STDKAANPVNMMGASKRIMEMFLMRKSEKMAISTARFANVAFSDGSLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESGEL
CLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQIGYEPHLCDSEDEARELAKTLPAQGKWPCLFTSSDTTGEKDFE
EFFTDKETLDMARFDNLGIIKNDPLYQQELLALFEQKIGQMKSDRQWTKEEIVQLFFTMIPDFGHKETGKYLDSKM
>Mature_396_residues
MNPILSLIGRTDALFTQDIASHEAELSRIVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSS
FGYINGDFQTFALDIGSIEYDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCV
STDKAANPVNMMGASKRIMEMFLMRKSEKMAISTARFANVAFSDGSLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESGEL
CLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQIGYEPHLCDSEDEARELAKTLPAQGKWPCLFTSSDTTGEKDFE
EFFTDKETLDMARFDNLGIIKNDPLYQQELLALFEQKIGQMKSDRQWTKEEIVQLFFTMIPDFGHKETGKYLDSKM

Specific function: Unknown

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 44979; Mature: 44979

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPILSLIGRTDALFTQDIASHEAELSRIVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKL
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEE
HVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYDYVLNLSALK
EEEECCCCCHHHHHHHHHHHCCEECCCCEEEEEEECCEEEEEEEEECCCEEEEEEHHHHH
HVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTDKAANPVNMMGASKRIME
HHHCCCCHHHHHHHHCCEEECCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHH
MFLMRKSEKMAISTARFANVAFSDGSLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESGEL
HHHHHCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCE
CLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQIGYEPHLCDSEDEARELAKTLPA
EEEEEHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
QGKWPCLFTSSDTTGEKDFEEFFTDKETLDMARFDNLGIIKNDPLYQQELLALFEQKIGQ
CCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHC
MKSDRQWTKEEIVQLFFTMIPDFGHKETGKYLDSKM
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MNPILSLIGRTDALFTQDIASHEAELSRIVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKL
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEE
HVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYDYVLNLSALK
EEEECCCCCHHHHHHHHHHHCCEECCCCEEEEEEECCEEEEEEEEECCCEEEEEEHHHHH
HVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTDKAANPVNMMGASKRIME
HHHCCCCHHHHHHHHCCEEECCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHH
MFLMRKSEKMAISTARFANVAFSDGSLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESGEL
HHHHHCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCE
CLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQIGYEPHLCDSEDEARELAKTLPA
EEEEEHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
QGKWPCLFTSSDTTGEKDFEEFFTDKETLDMARFDNLGIIKNDPLYQQELLALFEQKIGQ
CCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHC
MKSDRQWTKEEIVQLFFTMIPDFGHKETGKYLDSKM
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]