Click here to switch to the map view.

The map label for this gene is yhiR [H]

Identifier: 209693744

GI number: 209693744

Start: 155854

End: 156693

Strand: Reverse

Name: yhiR [H]

Synonym: VSAL_I0121

Alternate gene names: 209693744

Gene position: 156693-155854 (Counterclockwise)

Preceding gene: 209693746

Following gene: 209693743

Centisome position: 4.71

GC content: 41.07

Gene sequence:

>840_bases
ATGCTAAGTTATCGTCACAGTTTTCATGCTGGCAACCATGCCGACGTAGTTAAACACATTGTTCAAAGCCTTATCCTTAA
TTCATTAACGCTAAAAGATAAGCCATTTGTTTATCACGACACCCATTCAGGGGTTGGCCGTTACGATTTAACGCATGAAT
GGTCTGAAAAAACAGGTGAATACAAACAAGGTATTGAACGTATTTGGGATAAAACAGACATCCCAGAAGAAATCACAAGT
TACCTTGATGCCGTAAAAGCATTAAATGAAGACGGTGAATTACGTTATTACCCAGGGTCTCCTTGTGTTGGTCGTGCGCA
TATACGCTGTTATGACCGCATGGTATTAACCGAACTTCACCCTTCTGATTACCCATTGCTTGAACAAGAATTTCACAGTG
ATCGCCAAGTATCTATCTATAAAGAAGACGGTTTTGCTCGATTAAAAGCAAGCTTGCCGCCACCAGAGCGCAGAGGCTTG
GTATTAATCGACCCACCTTATGAGCTTGCAAAAGAATATTACGATGTGGTTAACGCGATTGGCCAAAGCCATAAACGTTG
GGCTACAGGTATTTATGCGATTTGGTACCCAGTGGTTAATCGTTGTGATATCGACGACATGATCAATGGCCTTAAAAAAC
TAAATATCCGTAACATTCTTCAAATTGAATTAGGGGTATCCCCTGATACAAACGAGCGTGGCATGACGGCATCAGGAATG
ATCGTTATCAATCCACCGTGGAAATTAGAAAGCCAAATGAATACGATTTTGCCTTTCTTAAAAGAAGCAATTGCACCAGC
AACAGGTCACTGTAAAGTGGAATGGATTGTTCCTGAATAA

Upstream 100 bases:

>100_bases
GGTGCTTAATGGATTAAATTTCAATGGGTGATGCAAGAGTGTGCACATTGCGTTATAAACTTGGGTATAATATTCCCATT
CAAATAGTGAGAGTTCATTC

Downstream 100 bases:

>100_bases
AAAATAAGGGTTCAGGCCGGTCGCAAGCTCCCTCAAAGGATTCAGGAAAAGCAGATAGCATTGCTCAGTTTTATCTCTTT
CCTGAAACCTGCAAGCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLSYRHSFHAGNHADVVKHIVQSLILNSLTLKDKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIERIWDKTDIPEEITS
YLDAVKALNEDGELRYYPGSPCVGRAHIRCYDRMVLTELHPSDYPLLEQEFHSDRQVSIYKEDGFARLKASLPPPERRGL
VLIDPPYELAKEYYDVVNAIGQSHKRWATGIYAIWYPVVNRCDIDDMINGLKKLNIRNILQIELGVSPDTNERGMTASGM
IVINPPWKLESQMNTILPFLKEAIAPATGHCKVEWIVPE

Sequences:

>Translated_279_residues
MLSYRHSFHAGNHADVVKHIVQSLILNSLTLKDKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIERIWDKTDIPEEITS
YLDAVKALNEDGELRYYPGSPCVGRAHIRCYDRMVLTELHPSDYPLLEQEFHSDRQVSIYKEDGFARLKASLPPPERRGL
VLIDPPYELAKEYYDVVNAIGQSHKRWATGIYAIWYPVVNRCDIDDMINGLKKLNIRNILQIELGVSPDTNERGMTASGM
IVINPPWKLESQMNTILPFLKEAIAPATGHCKVEWIVPE
>Mature_279_residues
MLSYRHSFHAGNHADVVKHIVQSLILNSLTLKDKPFVYHDTHSGVGRYDLTHEWSEKTGEYKQGIERIWDKTDIPEEITS
YLDAVKALNEDGELRYYPGSPCVGRAHIRCYDRMVLTELHPSDYPLLEQEFHSDRQVSIYKEDGFARLKASLPPPERRGL
VLIDPPYELAKEYYDVVNAIGQSHKRWATGIYAIWYPVVNRCDIDDMINGLKKLNIRNILQIELGVSPDTNERGMTASGM
IVINPPWKLESQMNTILPFLKEAIAPATGHCKVEWIVPE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=280, Percent_Identity=61.7857142857143, Blast_Score=366, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 31987; Mature: 31987

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHSFHAGNHADVVKHIVQSLILNSLTLKDKPFVYHDTHSGVGRYDLTHEWSEKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHCCH
YKQGIERIWDKTDIPEEITSYLDAVKALNEDGELRYYPGSPCVGRAHIRCYDRMVLTELH
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCC
PSDYPLLEQEFHSDRQVSIYKEDGFARLKASLPPPERRGLVLIDPPYELAKEYYDVVNAI
CCCCCCHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
GQSHKRWATGIYAIWYPVVNRCDIDDMINGLKKLNIRNILQIELGVSPDTNERGMTASGM
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCE
IVINPPWKLESQMNTILPFLKEAIAPATGHCKVEWIVPE
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHSFHAGNHADVVKHIVQSLILNSLTLKDKPFVYHDTHSGVGRYDLTHEWSEKTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHCCH
YKQGIERIWDKTDIPEEITSYLDAVKALNEDGELRYYPGSPCVGRAHIRCYDRMVLTELH
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCC
PSDYPLLEQEFHSDRQVSIYKEDGFARLKASLPPPERRGLVLIDPPYELAKEYYDVVNAI
CCCCCCHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
GQSHKRWATGIYAIWYPVVNRCDIDDMINGLKKLNIRNILQIELGVSPDTNERGMTASGM
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCE
IVINPPWKLESQMNTILPFLKEAIAPATGHCKVEWIVPE
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]