| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is gor [H]
Identifier: 209693743
GI number: 209693743
Start: 154286
End: 155641
Strand: Reverse
Name: gor [H]
Synonym: VSAL_I0120
Alternate gene names: 209693743
Gene position: 155641-154286 (Counterclockwise)
Preceding gene: 209693744
Following gene: 209693741
Centisome position: 4.68
GC content: 43.36
Gene sequence:
>1356_bases ATGGCTACTCATTTTGATTATATCTGTATCGGCGGTGGTTCTGGCGGTATCGCATCAGCAAACCGTGCGGCTATGCACGG CGCAAAAGTTGCTCTTATTGAAGCGCAAGAACTTGGCGGTACGTGTGTAAACGTGGGCTGTGTTCCTAAAAAAGTAATGT GGCACGGTGCTCAAGTTGCTGAAGCCATTAATTTATACGCTGAAGATTACGGCTTTGATGTTGAACTGAAAAAATTCAAT TGGAGCAAGATGGTTGAAAACCGCCAAGCGTACATTGGTCGTATTCACGAATCTTACGATCGCGTTCTTGGTAACAATAA AATAAACGTAATTAAAGGCTTCGCTAAGTTTGTAGACGCTAATACTGTTGAAGTAAATGGCGAACATTACACAGCGGATC ATATCCTTATTGCTGTTGGTGGTCGTCCAACAATCCCTAATATCCCAGGCGCAGAGCACGGTATTGATTCAAATGGTTTC TTTGACATCACAGAACAGCCAAAACGCGTTGCGATTATTGGTGCAGGTTACATTGCGGTAGAAATTGCTGGTGTACTTCA TTCTCTAGGCACAGAAACTCATTTATTTGTTCGTAAAGAATCTCCACTTCGTAGCTTTGATCCAATGATCATCGATACGC TAGTTGAAGTGATGAACACAGAAGGCCCAACCCTTCATACTCACTCTGTACCAAAAGAAGTGGTTAAAGAAGCCGATGGC AGCCTAACACTTCATCTAGAAAATGGTGAAACACAAAACGTTGATACTCTAATTTGGGCAATTGGTCGTCACCCTGCGAC TGACGCTATCAATCTAGAAAAAACAGGCGTTGCTATTAACGATCGCGGTTACATCAAAGTTGATGAATACCAATCAACAA ACGTAAAAGGCATCTACTGTGTTGGCGACATCATGGAAGGCGGCATCGAGCTAACTCCTATCGCAGTTAAAGCCGGTCGT TTACTGTCTGAGCGTTTATTCAACGGTCAAACAAACGCAAAAATGGACTACACACTAGTTCCTACTGTTGTGTTTAGCCA CCCACCGATTGGGACGATTGGTCTTACAGAACAAGAAGCTGACGAACAATACGGCAAAGATAACGTAAAAGTGTACACAT CAGGCTTCACAGCTATGTACACCGCCGTTACTAAGCACCGTCAACCTTGTAAAATGAAACTGGTTTGTGCTGGCGAAAAC GAAAAAGTGGTTGGCCTACACGGTATCGGTTTCACGGTTGATGAAATGATCCAAGGTTTTGCAGTAGCAATGAAGATGGG CGCAACTAAGGCTGATTTCGATGCCGTTGTTGCTATTCATCCAACAGGTTCTGAAGAATTTGTAACGATGAGATAG
Upstream 100 bases:
>100_bases TAGTAGACCTTGAAGCTCGTACACCTTGAAAAAGAAAAATTTGGTCGCATTTCATACATAGTATGTAAAAAAGAATTAAA AACTTATTGGAGAGAAAGTA
Downstream 100 bases:
>100_bases TCTATTTTTAGACTATTTTAAATAAAAAACGCCGCTAAGGTTAACCCTGGCGGCATTTTTGTTTGTTCTCTAATTCGTAT TAAAACTTAATGTGAGTGAT
Product: glutathione reductase
Products: NA
Alternate protein names: GR; GRase [H]
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MATHFDYICIGGGSGGIASANRAAMHGAKVALIEAQELGGTCVNVGCVPKKVMWHGAQVAEAINLYAEDYGFDVELKKFN WSKMVENRQAYIGRIHESYDRVLGNNKINVIKGFAKFVDANTVEVNGEHYTADHILIAVGGRPTIPNIPGAEHGIDSNGF FDITEQPKRVAIIGAGYIAVEIAGVLHSLGTETHLFVRKESPLRSFDPMIIDTLVEVMNTEGPTLHTHSVPKEVVKEADG SLTLHLENGETQNVDTLIWAIGRHPATDAINLEKTGVAINDRGYIKVDEYQSTNVKGIYCVGDIMEGGIELTPIAVKAGR LLSERLFNGQTNAKMDYTLVPTVVFSHPPIGTIGLTEQEADEQYGKDNVKVYTSGFTAMYTAVTKHRQPCKMKLVCAGEN EKVVGLHGIGFTVDEMIQGFAVAMKMGATKADFDAVVAIHPTGSEEFVTMR
Sequences:
>Translated_451_residues MATHFDYICIGGGSGGIASANRAAMHGAKVALIEAQELGGTCVNVGCVPKKVMWHGAQVAEAINLYAEDYGFDVELKKFN WSKMVENRQAYIGRIHESYDRVLGNNKINVIKGFAKFVDANTVEVNGEHYTADHILIAVGGRPTIPNIPGAEHGIDSNGF FDITEQPKRVAIIGAGYIAVEIAGVLHSLGTETHLFVRKESPLRSFDPMIIDTLVEVMNTEGPTLHTHSVPKEVVKEADG SLTLHLENGETQNVDTLIWAIGRHPATDAINLEKTGVAINDRGYIKVDEYQSTNVKGIYCVGDIMEGGIELTPIAVKAGR LLSERLFNGQTNAKMDYTLVPTVVFSHPPIGTIGLTEQEADEQYGKDNVKVYTSGFTAMYTAVTKHRQPCKMKLVCAGEN EKVVGLHGIGFTVDEMIQGFAVAMKMGATKADFDAVVAIHPTGSEEFVTMR >Mature_450_residues ATHFDYICIGGGSGGIASANRAAMHGAKVALIEAQELGGTCVNVGCVPKKVMWHGAQVAEAINLYAEDYGFDVELKKFNW SKMVENRQAYIGRIHESYDRVLGNNKINVIKGFAKFVDANTVEVNGEHYTADHILIAVGGRPTIPNIPGAEHGIDSNGFF DITEQPKRVAIIGAGYIAVEIAGVLHSLGTETHLFVRKESPLRSFDPMIIDTLVEVMNTEGPTLHTHSVPKEVVKEADGS LTLHLENGETQNVDTLIWAIGRHPATDAINLEKTGVAINDRGYIKVDEYQSTNVKGIYCVGDIMEGGIELTPIAVKAGRL LSERLFNGQTNAKMDYTLVPTVVFSHPPIGTIGLTEQEADEQYGKDNVKVYTSGFTAMYTAVTKHRQPCKMKLVCAGENE KVVGLHGIGFTVDEMIQGFAVAMKMGATKADFDAVVAIHPTGSEEFVTMR
Specific function: Maintains high levels of reduced glutathione in the cytosol [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=461, Percent_Identity=52.4945770065076, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI22035672, Length=459, Percent_Identity=39.2156862745098, Blast_Score=284, Evalue=1e-76, Organism=Homo sapiens, GI148277071, Length=455, Percent_Identity=35.3846153846154, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI148277065, Length=455, Percent_Identity=35.3846153846154, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI33519430, Length=455, Percent_Identity=35.3846153846154, Blast_Score=262, Evalue=4e-70, Organism=Homo sapiens, GI33519428, Length=455, Percent_Identity=35.3846153846154, Blast_Score=262, Evalue=4e-70, Organism=Homo sapiens, GI33519426, Length=455, Percent_Identity=35.3846153846154, Blast_Score=262, Evalue=4e-70, Organism=Homo sapiens, GI291045266, Length=458, Percent_Identity=33.6244541484716, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI291045268, Length=458, Percent_Identity=30.1310043668122, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI91199540, Length=459, Percent_Identity=28.5403050108932, Blast_Score=162, Evalue=8e-40, Organism=Escherichia coli, GI1789915, Length=451, Percent_Identity=69.6230598669623, Blast_Score=647, Evalue=0.0, Organism=Escherichia coli, GI1786307, Length=444, Percent_Identity=28.3783783783784, Blast_Score=164, Evalue=9e-42, Organism=Escherichia coli, GI87082354, Length=425, Percent_Identity=26.3529411764706, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI87081717, Length=455, Percent_Identity=26.3736263736264, Blast_Score=140, Evalue=1e-34, Organism=Caenorhabditis elegans, GI71983419, Length=450, Percent_Identity=56, Blast_Score=452, Evalue=1e-127, Organism=Caenorhabditis elegans, GI71983429, Length=449, Percent_Identity=56.1247216035635, Blast_Score=452, Evalue=1e-127, Organism=Caenorhabditis elegans, GI17557007, Length=474, Percent_Identity=36.4978902953587, Blast_Score=293, Evalue=9e-80, Organism=Caenorhabditis elegans, GI71982272, Length=481, Percent_Identity=34.3035343035343, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI32565766, Length=471, Percent_Identity=30.5732484076433, Blast_Score=173, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6325166, Length=464, Percent_Identity=50, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6321091, Length=464, Percent_Identity=27.5862068965517, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6325240, Length=479, Percent_Identity=22.964509394572, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI24640549, Length=469, Percent_Identity=39.2324093816631, Blast_Score=295, Evalue=6e-80, Organism=Drosophila melanogaster, GI24640553, Length=469, Percent_Identity=39.2324093816631, Blast_Score=294, Evalue=7e-80, Organism=Drosophila melanogaster, GI24640551, Length=469, Percent_Identity=39.2324093816631, Blast_Score=293, Evalue=1e-79, Organism=Drosophila melanogaster, GI17737741, Length=471, Percent_Identity=36.9426751592357, Blast_Score=276, Evalue=3e-74, Organism=Drosophila melanogaster, GI21358499, Length=461, Percent_Identity=29.9349240780911, Blast_Score=157, Evalue=1e-38,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006322 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.7 [H]
Molecular weight: Translated: 48907; Mature: 48776
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHFDYICIGGGSGGIASANRAAMHGAKVALIEAQELGGTCVNVGCVPKKVMWHGAQVA CCCEEEEEEEECCCCCCCCCCHHHHCCCEEEEEEHHHCCCEEEEECCCCHHHHHCCHHHH EAINLYAEDYGFDVELKKFNWSKMVENRQAYIGRIHESYDRVLGNNKINVIKGFAKFVDA HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCC NTVEVNGEHYTADHILIAVGGRPTIPNIPGAEHGIDSNGFFDITEQPKRVAIIGAGYIAV CEEEECCCEEEECEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHH EIAGVLHSLGTETHLFVRKESPLRSFDPMIIDTLVEVMNTEGPTLHTHSVPKEVVKEADG HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCC SLTLHLENGETQNVDTLIWAIGRHPATDAINLEKTGVAINDRGYIKVDEYQSTNVKGIYC CEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCEEECCCCCEEEECCCCCCCCEEEE VGDIMEGGIELTPIAVKAGRLLSERLFNGQTNAKMDYTLVPTVVFSHPPIGTIGLTEQEA EEEHHHCCEEEEEEEEHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCEECCCCHHH DEQYGKDNVKVYTSGFTAMYTAVTKHRQPCKMKLVCAGENEKVVGLHGIGFTVDEMIQGF HHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHH AVAMKMGATKADFDAVVAIHPTGSEEFVTMR HHHHHCCCCCCCCCEEEEEECCCCCCEEEEC >Mature Secondary Structure ATHFDYICIGGGSGGIASANRAAMHGAKVALIEAQELGGTCVNVGCVPKKVMWHGAQVA CCEEEEEEEECCCCCCCCCCHHHHCCCEEEEEEHHHCCCEEEEECCCCHHHHHCCHHHH EAINLYAEDYGFDVELKKFNWSKMVENRQAYIGRIHESYDRVLGNNKINVIKGFAKFVDA HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCC NTVEVNGEHYTADHILIAVGGRPTIPNIPGAEHGIDSNGFFDITEQPKRVAIIGAGYIAV CEEEECCCEEEECEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCHHHH EIAGVLHSLGTETHLFVRKESPLRSFDPMIIDTLVEVMNTEGPTLHTHSVPKEVVKEADG HHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCC SLTLHLENGETQNVDTLIWAIGRHPATDAINLEKTGVAINDRGYIKVDEYQSTNVKGIYC CEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCEEECCCCCEEEECCCCCCCCEEEE VGDIMEGGIELTPIAVKAGRLLSERLFNGQTNAKMDYTLVPTVVFSHPPIGTIGLTEQEA EEEHHHCCEEEEEEEEHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCEECCCCHHH DEQYGKDNVKVYTSGFTAMYTAVTKHRQPCKMKLVCAGENEKVVGLHGIGFTVDEMIQGF HHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHH AVAMKMGATKADFDAVVAIHPTGSEEFVTMR HHHHHCCCCCCCCCEEEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3521741; 8041620; 9278503; 2006135; 8061609 [H]