| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535380
Identifier: 308535380
GI number: 308535380
Start: 4166691
End: 4167461
Strand: Direct
Name: 308535380
Synonym: NA
Alternate gene names: NA
Gene position: 4166691-4167461 (Clockwise)
Preceding gene: 197120002
Following gene: 197120004
Centisome position: 90.28
GC content: 64.33
Gene sequence:
>771_bases GTGGCGGTCTTGAGGGGAATTTGCTGCGGCTTCATCCTGGCGGCGACGCTGGCGCTTCTTTCCGGCTGCGGCAAGAAAGG ACCGCTGGTGCCGCCGGAAGCGCTGGTGCCGGCGCCGGTCACGAACCTGGCGCTGGCCCAGAAGGATGGACGGTTCCAGG TGAGATGGTCCGCGCCTTCGAAGCAGGAAGGGGGCGCCGCGCTTAAGGACCTGGCCGGCTTTCTCCTGTTCAAGCGCGTA GTGCTCCCCCCCAACGACGATTGCGAGGAATGCGCGACCGCCTACGGCGAACCGGTGAAGATAGAAATCGAGTACCCCAA GGCGGCAAAGCGCTCCGGGAACTTCTGGGTCTACGACGACCGCGACCTGACCACCGGGAAGCTGTACCAGTATAAGCTCC GCTCCTTCACGACGGCAGGTGTCCAGAGCAAGGATTCCAACCGGGTGCGCCGTACCGCGGCCATCCCACCGCTCCCCCCC GTGCTGGAGGCCGCATCCTCCGCCGAAGCGGTGACGCTTTCCTTTGTGGGGCTCCCCCCGGAGCAGGGAACGCCCGCCGG GTACAACATCTACCGCAGCAAGAAGGGGGAAGAGTTCCCCCTCTTCCCGCTCAACGCGACGCCGGTCACCGCCAACAACT ACATAGACCACCTCCCGCAATTCGGCGTTCCCTTCAGCTATGCGGTCACGAGCGTCGCCACGGTAGGGGAAGAGACCGTA GAGAGCGCACCCTCAAACGTTGCGGAAGGTTCCCTGACGCTTCCTGAATAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: lipoprotein
Products: NA
Alternate protein names: Fibronectin Type III Domain Protein; Fibronectin Type III; Lipoprotein
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
NA
Sequences:
>Translated_256_residues MAVLRGICCGFILAATLALLSGCGKKGPLVPPEALVPAPVTNLALAQKDGRFQVRWSAPSKQEGGAALKDLAGFLLFKRV VLPPNDDCEECATAYGEPVKIEIEYPKAAKRSGNFWVYDDRDLTTGKLYQYKLRSFTTAGVQSKDSNRVRRTAAIPPLPP VLEAASSAEAVTLSFVGLPPEQGTPAGYNIYRSKKGEEFPLFPLNATPVTANNYIDHLPQFGVPFSYAVTSVATVGEETV ESAPSNVAEGSLTLPE >Mature_255_residues AVLRGICCGFILAATLALLSGCGKKGPLVPPEALVPAPVTNLALAQKDGRFQVRWSAPSKQEGGAALKDLAGFLLFKRVV LPPNDDCEECATAYGEPVKIEIEYPKAAKRSGNFWVYDDRDLTTGKLYQYKLRSFTTAGVQSKDSNRVRRTAAIPPLPPV LEAASSAEAVTLSFVGLPPEQGTPAGYNIYRSKKGEEFPLFPLNATPVTANNYIDHLPQFGVPFSYAVTSVATVGEETVE SAPSNVAEGSLTLPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27360; Mature: 27229
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLRGICCGFILAATLALLSGCGKKGPLVPPEALVPAPVTNLALAQKDGRFQVRWSAPS CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEECCCC KQEGGAALKDLAGFLLFKRVVLPPNDDCEECATAYGEPVKIEIEYPKAAKRSGNFWVYDD CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCHHHCCCCCEEEEEC RDLTTGKLYQYKLRSFTTAGVQSKDSNRVRRTAAIPPLPPVLEAASSAEAVTLSFVGLPP CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCEEEEEEEECCC EQGTPAGYNIYRSKKGEEFPLFPLNATPVTANNYIDHLPQFGVPFSYAVTSVATVGEETV CCCCCCCCEEEECCCCCCCCEEECCCCCEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHH ESAPSNVAEGSLTLPE HHCCCCCCCCCEECCC >Mature Secondary Structure AVLRGICCGFILAATLALLSGCGKKGPLVPPEALVPAPVTNLALAQKDGRFQVRWSAPS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEECCCC KQEGGAALKDLAGFLLFKRVVLPPNDDCEECATAYGEPVKIEIEYPKAAKRSGNFWVYDD CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCHHHCCCCCEEEEEC RDLTTGKLYQYKLRSFTTAGVQSKDSNRVRRTAAIPPLPPVLEAASSAEAVTLSFVGLPP CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCEEEEEEEECCC EQGTPAGYNIYRSKKGEEFPLFPLNATPVTANNYIDHLPQFGVPFSYAVTSVATVGEETV CCCCCCCCEEEECCCCCCCCEEECCCCCEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHH ESAPSNVAEGSLTLPE HHCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA