| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 308535359
Identifier: 308535359
GI number: 308535359
Start: 3737851
End: 3739278
Strand: Direct
Name: 308535359
Synonym: NA
Alternate gene names: NA
Gene position: 3737851-3739278 (Clockwise)
Preceding gene: 197119603
Following gene: 197119614
Centisome position: 80.99
GC content: 52.1
Gene sequence:
>1428_bases TCATTGATACCCTCCATTTTGAAGGAAAGTGAGCCCCACCGCTTCGTTGTCCTCTATGGCAATCTCCACGGCCCACTTGG CTCGCGCCAGCAGAGCATGGGCCTGTTTGCGTGCGGCGTGTGAATCGCGTACAAGCTTTGCAACCTCTTCAGCTACATCC GATGACGGTTGAACAAAAGGCAGTTTCAAAATATCTGGTACAGAAATAGCCGGGTACATTGAAGCCGTAGTGTGCAAGTC CATCAATTCAGCGATAACCGGCAGGCGTAGATAGACCAGCAAAAGTTCAGAGAACGCACGATAGGGTTCGAGCACTGCAA ATCCGGACGAGCAGACAAAACCATCCTGTTCCGGGTAGATGACGGCACTCAGGCGTCTAATTGGGCGGACGGTGGAGGTA ATGACATCTCCACTACGAACATGCCAAGTGGCGCGGTCCGGCGTCTCGTCGGCGGGAACGCTGGAACTATTGACTTCGCC GCTGGCCGTAACACCGCCGATTTCGATGTACTCGAAGGTTTCATGCCGGGATGGAATGAAATATTCTTTGCGAAGACGCG CCACATCGCCGACGCTCAGGTTATCTCGGCTGAGAATTTGTATCAGGGTTTGCACCCGTGGACTGAAATATTGAGAATCC AGCCGTCCAGCGGTTAATGTTTCGCTGGCATTGCGCTCATATGTCAGCGGCTCCGGCGGCGTCCAGTCTTCAAGACCGAG AGTGCGGAGAAGGATTTCCTCGGCCTGACGGTAGAGATTGAAGCTGTTATCGAGCGCGTTTTTTGCCTTTTCAACGGCCC TTTCTACAGCGATCTCCAACTTACCCAAAAAACGGGGGATGCGTAGTTGATCCATATCCTCCAGCAGCAACCCCATTTGC ACGGCTCCCCGCTTGAGACGATGGATTTGATCTTGCCCGTATCTAGACTTGAGGAAAACAGCCAAGTAACCCGGTTTAAC CGTTTGAGGACGTAGTATTGCTAGCTTACAACTACAAGTTGCATCTGACTCAGAGCTGACAAGGCTTAACTCCCCAATGG TGCCAACAATGGATAGCAGCACATCACCCTTGTGCAGGTGAGACCGCAACATGTGCGACACCGAAAAGGCTTTCTGCGGA ATAAAGACCGGCTGTGACTGCTCAATATAAAAATGCCCGGTGACGTCTTGCCCTCGATAATACGGGATTCCTTCTTCCTG GAACTCTTCACTGATACTGAAATGGTTTCCGTCTGAGATGTCGGCTACGCGATCTAGTGCTTCTGTATGGATTTGGTCCA GACGCTTTGCAGCATCAATACGCGATTTGCTGAAATACTCTGCATCGACTCGCAGAGTACGCTCCAGCTCAGAGAAACGT ATCACTACTGCCTCCAGCCCCTCCAGCAAGCCCCGGTAACGGGCCTCGTCAAAGGGGCTTAGGGAAAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: type I restriction/modification system N-6 DNA methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
NA
Sequences:
>Translated_476_residues SLIPSILKESEPHRFVVLYGNLHGPLGSRQQSMGLFACGV*IAYKLCNLFSYIR*RLNKRQFQNIWYRNSRVH*SRSVQV HQFSDNRQA*IDQQKFRERTIGFEHCKSGRADKTILFRVDDGTQASNWADGGGNDISTTNMPSGAVRRLVGGNAGTIDFA AGRNTADFDVLEGFMPGWNEIFFAKTRHIADAQVISAENLYQGLHPWTEILRIQPSSG*CFAGIALICQRLRRRPVFKTE SAEKDFLGLTVEIEAVIERVFCLFNGPFYSDLQLTQKTGDA*LIHILQQQPHLHGSPLETMDLILPVSRLEENSQVTRFN RLRT*YC*LTTTSCI*LRADKA*LPNGANNG*QHITLVQVRPQHVRHRKGFLRNKDRL*LLNIKMPGDVLPSIIRDSFFL ELFTDTEMVSV*DVGYAI*CFCMDLVQTLCSINTRFAEILCIDSQSTLQLRETYHYCLQPLQQAPVTGLVKGA*GK >Mature_476_residues SLIPSILKESEPHRFVVLYGNLHGPLGSRQQSMGLFACGV*IAYKLCNLFSYIR*RLNKRQFQNIWYRNSRVH*SRSVQV HQFSDNRQA*IDQQKFRERTIGFEHCKSGRADKTILFRVDDGTQASNWADGGGNDISTTNMPSGAVRRLVGGNAGTIDFA AGRNTADFDVLEGFMPGWNEIFFAKTRHIADAQVISAENLYQGLHPWTEILRIQPSSG*CFAGIALICQRLRRRPVFKTE SAEKDFLGLTVEIEAVIERVFCLFNGPFYSDLQLTQKTGDA*LIHILQQQPHLHGSPLETMDLILPVSRLEENSQVTRFN RLRT*YC*LTTTSCI*LRADKA*LPNGANNG*QHITLVQVRPQHVRHRKGFLRNKDRL*LLNIKMPGDVLPSIIRDSFFL ELFTDTEMVSV*DVGYAI*CFCMDLVQTLCSINTRFAEILCIDSQSTLQLRETYHYCLQPLQQAPVTGLVKGA*GK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51794; Mature: 51794
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure SLIPSILKESEPHRFVVLYGNLHGPLGSRQQSMGLFACGVIAYKLCNLFSYIRRLNKRQF CCCHHHHHCCCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH QNIWYRNSRVHSRSVQVHQFSDNRQAIDQQKFRERTIGFEHCKSGRADKTILFRVDDGTQ HHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCC ASNWADGGGNDISTTNMPSGAVRRLVGGNAGTIDFAAGRNTADFDVLEGFMPGWNEIFFA CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCCCCEEEE KTRHIADAQVISAENLYQGLHPWTEILRIQPSSGCFAGIALICQRLRRRPVFKTESAEKD HHCCCCCHHHCCHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC FLGLTVEIEAVIERVFCLFNGPFYSDLQLTQKTGDALIHILQQQPHLHGSPLETMDLILP CEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH VSRLEENSQVTRFNRLRTYCLTTTSCILRADKALPNGANNGQHITLVQVRPQHVRHRKGF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHH LRNKDRLLLNIKMPGDVLPSIIRDSFFLELFTDTEMVSVDVGYAICFCMDLVQTLCSINT HCCCCEEEEEEECCHHHHHHHHHHHHEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCC RFAEILCIDSQSTLQLRETYHYCLQPLQQAPVTGLVKGAGK CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA