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The map label for this gene is yfaO [C]

Identifier: 197120000

GI number: 197120000

Start: 4163256

End: 4163684

Strand: Direct

Name: yfaO [C]

Synonym: Gbem_3639

Alternate gene names: 197120000

Gene position: 4163256-4163684 (Clockwise)

Preceding gene: 197119999

Following gene: 197120001

Centisome position: 90.21

GC content: 57.81

Gene sequence:

>429_bases
ATGGAGCAAAACGAGTTCAAGGCGGGCCATATTGTCACCTCGGTGGTAGCCGTCATCATCGACACCGACGACCGGGTGCT
TCTCACCAAGCGCAACGTCCCTCCCTTCCAGGGCGAATGGGTGATGCCGGGTGGGAAGATCGATCTCGGGGAGCCCATCG
TAGCCGCGCTCAAGCGCGAGGTGTGGGAGGAAGTAGGCCTCGAAGTGGAGGTAGGGGAGTTGATCGACGTCTTCGAGCAT
GTGACGCCAGGCGAAGACAACTATCACTTCATCATAATCTATTACCGCTGCACCCCGCTTTACTGCGACGTGAAGCACAA
CCGGGACGAAGTGTCCGAGGCGCGCTGGGTAGCCGCCGAAGAATTGGCGGAGTACAAGATCCCCGCCGGCGCACGGTTCA
TTCTGGGAAAAACGTTTAAAACCGTTTAA

Upstream 100 bases:

>100_bases
TCCGTTCGCTCATGCTGGCCAACAAGAACAAGTAAGGCAACTGGCAGTACAGGAGGGTCCATAGGGGCACGAAACCTTTC
GTGCCCCTATCTCGCTTTAT

Downstream 100 bases:

>100_bases
AACCGTTTAGAACCGTTTAGAACCAATTGACAATTGATAATTGACAATTGACAATGGGAACCCCTTCTCAGCTCCACTGT
CACTTGTCCATCTTCAACTG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ORF154 [H]

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MEQNEFKAGHIVTSVVAVIIDTDDRVLLTKRNVPPFQGEWVMPGGKIDLGEPIVAALKREVWEEVGLEVEVGELIDVFEH
VTPGEDNYHFIIIYYRCTPLYCDVKHNRDEVSEARWVAAEELAEYKIPAGARFILGKTFKTV

Sequences:

>Translated_142_residues
MEQNEFKAGHIVTSVVAVIIDTDDRVLLTKRNVPPFQGEWVMPGGKIDLGEPIVAALKREVWEEVGLEVEVGELIDVFEH
VTPGEDNYHFIIIYYRCTPLYCDVKHNRDEVSEARWVAAEELAEYKIPAGARFILGKTFKTV
>Mature_142_residues
MEQNEFKAGHIVTSVVAVIIDTDDRVLLTKRNVPPFQGEWVMPGGKIDLGEPIVAALKREVWEEVGLEVEVGELIDVFEH
VTPGEDNYHFIIIYYRCTPLYCDVKHNRDEVSEARWVAAEELAEYKIPAGARFILGKTFKTV

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.1.-

Molecular weight: Translated: 16131; Mature: 16131

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNEFKAGHIVTSVVAVIIDTDDRVLLTKRNVPPFQGEWVMPGGKIDLGEPIVAALKRE
CCCCCCCHHHHHHHHEEEEECCCCEEEEEECCCCCCCCCEECCCCCEECCCHHHHHHHHH
VWEEVGLEVEVGELIDVFEHVTPGEDNYHFIIIYYRCTPLYCDVKHNRDEVSEARWVAAE
HHHHHCCEEEHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCHHHHHHHHHHHHH
ELAEYKIPAGARFILGKTFKTV
HHHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MEQNEFKAGHIVTSVVAVIIDTDDRVLLTKRNVPPFQGEWVMPGGKIDLGEPIVAALKRE
CCCCCCCHHHHHHHHEEEEECCCCEEEEEECCCCCCCCCEECCCCCEECCCHHHHHHHHH
VWEEVGLEVEVGELIDVFEHVTPGEDNYHFIIIYYRCTPLYCDVKHNRDEVSEARWVAAE
HHHHHCCEEEHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCHHHHHHHHHHHHH
ELAEYKIPAGARFILGKTFKTV
HHHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934842 [H]