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The map label for this gene is recA

Identifier: 197119991

GI number: 197119991

Start: 4151803

End: 4152819

Strand: Direct

Name: recA

Synonym: Gbem_3630

Alternate gene names: 197119991

Gene position: 4151803-4152819 (Clockwise)

Preceding gene: 197119990

Following gene: 197119992

Centisome position: 89.96

GC content: 62.93

Gene sequence:

>1017_bases
ATGCTCGACAAGGATAAAGCGGAAAAGGCCCTGGACCTGGCGATGAGCCAGATTGAAAAGCAGTTCGGCAAAGGGGCCAT
CATGAGGCTCGGCAATGAAGAGGCGCTTCCCGACATCGCCTCCATCCCGACCGGGTCGCTCTCGCTCGACATCGCGCTCG
GCGTGGGAGGGGTGCCGCGCGGCCGCGTGATCGAGATCTTCGGACCGGAATCCTCCGGCAAGACCACCCTGGCCTTGCAC
GTCATCTCCGAGGCGCAGAAGCTGGGCGGAATCGCCGCCTTCGTGGACGCCGAGCACGCCCTCGATATCGGCTACGCCAG
AAAGCTCGGCGTGAAGACGGACGACCTCCTGGTCTCCCAGCCGGATACCGGCGAGCAGGCGCTGGAAATCGCCGAGACCC
TGGTAAGAAGCGGCGCCATCGACGTCCTCGTCGTAGACTCCGTGGCCGCCCTGGTCCCCAAGGCTGAGATCGAGGGGGAC
ATGGGTGACTCCCACATGGGTCTGCAGGCGCGCCTCATGTCCCAGGCGCTCAGGAAGCTGACCGGCATCATCTCCAAGAG
CAACTGCTGCGTCATCTTCATCAACCAGATCAGGATGAAGATCGGCGTCATGTTCGGCAACCCCGAAACCACCACCGGCG
GCAACGCGCTCAAGTTCTACGCCTCGGTCCGCATGGACATCAGGAAGATCGCGGCGCTCAAGCAGGGCAACGACATGATC
GGCTCCCGCACCCGCGTCAAGGTAGTGAAGAACAAGGTCGCCCCCCCCTTCAAGGAAGTCGAGTTCGACATCCTCTACGG
CGAAGGGATCTCCAAGGAAGGGGACATCCTGGACCTCGCCGTGGAGCGCAACGTGGTTGAGAAAAGCGGCGCCTGGTTCT
CCTACGGCAAGGAGCGCATCGGGCAGGGGCGCGAAAACTCCCGCCTGTTCCTGAAGGAGCACCCGGAGATCACCGCCGAA
ATCAGGGAAAAGCTGGTCAACCCCCAACAAGACGCCGCAACTCCCGGCGCAGCCTAA

Upstream 100 bases:

>100_bases
TTTTTACTCGTTGAAAACCCGCTCCGGGTTGTGCTATTGGTGATGGGATTTTTTACCGGACAACGACCTGCTTTTGTGCA
GGCTACAGGAGATATAGACG

Downstream 100 bases:

>100_bases
ACCATGGAACTTAACGAGATCCTCGGCATAGCCATGAAGGCGAAGGGGTCCGACATCCACCTGAAGGCGGGGCTTCCCCC
CATCGTCAGGATCGACGGCG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MLDKDKAEKALDLAMSQIEKQFGKGAIMRLGNEEALPDIASIPTGSLSLDIALGVGGVPRGRVIEIFGPESSGKTTLALH
VISEAQKLGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGEQALEIAETLVRSGAIDVLVVDSVAALVPKAEIEGD
MGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMDIRKIAALKQGNDMI
GSRTRVKVVKNKVAPPFKEVEFDILYGEGISKEGDILDLAVERNVVEKSGAWFSYGKERIGQGRENSRLFLKEHPEITAE
IREKLVNPQQDAATPGAA

Sequences:

>Translated_338_residues
MLDKDKAEKALDLAMSQIEKQFGKGAIMRLGNEEALPDIASIPTGSLSLDIALGVGGVPRGRVIEIFGPESSGKTTLALH
VISEAQKLGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGEQALEIAETLVRSGAIDVLVVDSVAALVPKAEIEGD
MGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMDIRKIAALKQGNDMI
GSRTRVKVVKNKVAPPFKEVEFDILYGEGISKEGDILDLAVERNVVEKSGAWFSYGKERIGQGRENSRLFLKEHPEITAE
IREKLVNPQQDAATPGAA
>Mature_338_residues
MLDKDKAEKALDLAMSQIEKQFGKGAIMRLGNEEALPDIASIPTGSLSLDIALGVGGVPRGRVIEIFGPESSGKTTLALH
VISEAQKLGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGEQALEIAETLVRSGAIDVLVVDSVAALVPKAEIEGD
MGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMDIRKIAALKQGNDMI
GSRTRVKVVKNKVAPPFKEVEFDILYGEGISKEGDILDLAVERNVVEKSGAWFSYGKERIGQGRENSRLFLKEHPEITAE
IREKLVNPQQDAATPGAA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=339, Percent_Identity=65.1917404129793, Blast_Score=448, Evalue=1e-127,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_GEOBB (B5ED05)

Other databases:

- EMBL:   CP001124
- RefSeq:   YP_002140418.1
- ProteinModelPortal:   B5ED05
- SMR:   B5ED05
- GeneID:   6780494
- GenomeReviews:   CP001124_GR
- KEGG:   gbm:Gbem_3630
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 36325; Mature: 36325

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKDKAEKALDLAMSQIEKQFGKGAIMRLGNEEALPDIASIPTGSLSLDIALGVGGVPR
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCEEEEEEECCCCCCC
GRVIEIFGPESSGKTTLALHVISEAQKLGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQ
CCEEEEECCCCCCCEEEEEEEHHHHHHHCCEEEEECCHHHHHCCHHHHCCCCCCCEEEEC
PDTGEQALEIAETLVRSGAIDVLVVDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKL
CCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHH
TGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMDIRKIAALKQGNDMI
HHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHH
GSRTRVKVVKNKVAPPFKEVEFDILYGEGISKEGDILDLAVERNVVEKSGAWFSYGKERI
CCCHHHHHHHHCCCCCHHHCEEEEEECCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHH
GQGRENSRLFLKEHPEITAEIREKLVNPQQDAATPGAA
CCCCCCCEEEEECCCCHHHHHHHHHCCCCHHCCCCCCC
>Mature Secondary Structure
MLDKDKAEKALDLAMSQIEKQFGKGAIMRLGNEEALPDIASIPTGSLSLDIALGVGGVPR
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCEEEEEEECCCCCCC
GRVIEIFGPESSGKTTLALHVISEAQKLGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQ
CCEEEEECCCCCCCEEEEEEEHHHHHHHCCEEEEECCHHHHHCCHHHHCCCCCCCEEEEC
PDTGEQALEIAETLVRSGAIDVLVVDSVAALVPKAEIEGDMGDSHMGLQARLMSQALRKL
CCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHH
TGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMDIRKIAALKQGNDMI
HHHHCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHH
GSRTRVKVVKNKVAPPFKEVEFDILYGEGISKEGDILDLAVERNVVEKSGAWFSYGKERI
CCCHHHHHHHHCCCCCHHHCEEEEEECCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHH
GQGRENSRLFLKEHPEITAEIREKLVNPQQDAATPGAA
CCCCCCCEEEEECCCCHHHHHHHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA