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The map label for this gene is yccZ [C]

Identifier: 197118154

GI number: 197118154

Start: 2040078

End: 2040884

Strand: Direct

Name: yccZ [C]

Synonym: Gbem_1769

Alternate gene names: 197118154

Gene position: 2040078-2040884 (Clockwise)

Preceding gene: 197118153

Following gene: 197118155

Centisome position: 44.2

GC content: 58.98

Gene sequence:

>807_bases
ATGAAACTGAAAGTCCTGCTATTGTCCGTCTTTCTCATCACGTGCATGCCCCTTTTTGCCCTGGCGGCTGACTACCAGAT
CGGTGAGGGCGACAGCCTCGACATTGCCGTCTGGGGGGTGAAGGAGCTGAATTTCCCGGTGAAGGTGCGTCCTGACGGCA
AGATCACGGTCCCCGGGCTGGGCGAGGTGGTTGCCAGCGGCATGGCCCCGAGCACACTGCAGACTCATCTCGCGGCAAGA
CTCAAGGAACTGGTGAAAAACCCCATCGTCACCGTCACCGTGCGTGAGATCACCAACTCCAAGGTCTACATCTTCGGCTC
GGGCGTCAAAGCCGCCGTCTACGACCTTTCCCGCCGTACCACTTTGCTGCAGCTCCTTTGCACCCTGCCGGACGTGAAGA
CCGCCGACCTCCGCAATTCTTACCTGTTGAGGGGAGGGCAGAAGGTGAAGACCGACCTGTACCGGCTCTTCACCCTGGGG
GACATCGGGCAGGACCTGCTCCTTGAATCCAACGATTCCCTCTTCATCCCGCTTCTGACCGACCGCAGCGTCTACGTCCT
GGGCGCGGTCAACACCCCGAAGGCGATCGAGTACCGGGAGGGGATGAAGGTGATGGAAGCGATCCTGGAGTCGGGTGGTT
TCAACAAGTTCGCCAACCAGAACGAGGTGCTGGTACGTAGGAAAAGCGGCGCCCAGGAGCAGTCGCTGGAGGTTAAGGCC
AAGAAGCTCTTTAAAGACGGTGACCTGAGCCAGAACATCGAGCTCAAGCCTGGCGATTACGTGCTGGTGAAGGAGAGTTT
CTTCTAG

Upstream 100 bases:

>100_bases
ATCAAGAACCTCTCCTTCCTTCTTGACACGCAGATCATCTTCGAGACAGTGAAGGTGGTTTTGTTTGGCCGGGGGCGGTA
GGAGGGGAGGAGGTGCCCAG

Downstream 100 bases:

>100_bases
CGCTTGGAAACATTTCTGCAGCATTTTTCGAATGGAAGCAGCACCTTTTAAGGACAGGAGTTCTATGCAGTCGCCAGAGA
CCGAGTACAAGAAGTATCTG

Product: polysaccharide biosynthesis/export lipoprotein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKLKVLLLSVFLITCMPLFALAADYQIGEGDSLDIAVWGVKELNFPVKVRPDGKITVPGLGEVVASGMAPSTLQTHLAAR
LKELVKNPIVTVTVREITNSKVYIFGSGVKAAVYDLSRRTTLLQLLCTLPDVKTADLRNSYLLRGGQKVKTDLYRLFTLG
DIGQDLLLESNDSLFIPLLTDRSVYVLGAVNTPKAIEYREGMKVMEAILESGGFNKFANQNEVLVRRKSGAQEQSLEVKA
KKLFKDGDLSQNIELKPGDYVLVKESFF

Sequences:

>Translated_268_residues
MKLKVLLLSVFLITCMPLFALAADYQIGEGDSLDIAVWGVKELNFPVKVRPDGKITVPGLGEVVASGMAPSTLQTHLAAR
LKELVKNPIVTVTVREITNSKVYIFGSGVKAAVYDLSRRTTLLQLLCTLPDVKTADLRNSYLLRGGQKVKTDLYRLFTLG
DIGQDLLLESNDSLFIPLLTDRSVYVLGAVNTPKAIEYREGMKVMEAILESGGFNKFANQNEVLVRRKSGAQEQSLEVKA
KKLFKDGDLSQNIELKPGDYVLVKESFF
>Mature_268_residues
MKLKVLLLSVFLITCMPLFALAADYQIGEGDSLDIAVWGVKELNFPVKVRPDGKITVPGLGEVVASGMAPSTLQTHLAAR
LKELVKNPIVTVTVREITNSKVYIFGSGVKAAVYDLSRRTTLLQLLCTLPDVKTADLRNSYLLRGGQKVKTDLYRLFTLG
DIGQDLLLESNDSLFIPLLTDRSVYVLGAVNTPKAIEYREGMKVMEAILESGGFNKFANQNEVLVRRKSGAQEQSLEVKA
KKLFKDGDLSQNIELKPGDYVLVKESFF

Specific function: May be involved in polysaccharide transport [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=259, Percent_Identity=28.957528957529, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1788376, Length=205, Percent_Identity=27.8048780487805, Blast_Score=77, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 29571; Mature: 29571

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKVLLLSVFLITCMPLFALAADYQIGEGDSLDIAVWGVKELNFPVKVRPDGKITVPGL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCEEECCCCEEECCCH
GEVVASGMAPSTLQTHLAARLKELVKNPIVTVTVREITNSKVYIFGSGVKAAVYDLSRRT
HHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEECCCCEEHHHHHHHH
TLLQLLCTLPDVKTADLRNSYLLRGGQKVKTDLYRLFTLGDIGQDLLLESNDSLFIPLLT
HHHHHHHHCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHEEECCCCEEEEEEC
DRSVYVLGAVNTPKAIEYREGMKVMEAILESGGFNKFANQNEVLVRRKSGAQEQSLEVKA
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHH
KKLFKDGDLSQNIELKPGDYVLVKESFF
HHHHCCCCCCCCEEECCCCEEEEEECCC
>Mature Secondary Structure
MKLKVLLLSVFLITCMPLFALAADYQIGEGDSLDIAVWGVKELNFPVKVRPDGKITVPGL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCEEECCCCEEECCCH
GEVVASGMAPSTLQTHLAARLKELVKNPIVTVTVREITNSKVYIFGSGVKAAVYDLSRRT
HHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEECCCCEEHHHHHHHH
TLLQLLCTLPDVKTADLRNSYLLRGGQKVKTDLYRLFTLGDIGQDLLLESNDSLFIPLLT
HHHHHHHHCCCCCCHHCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHEEECCCCEEEEEEC
DRSVYVLGAVNTPKAIEYREGMKVMEAILESGGFNKFANQNEVLVRRKSGAQEQSLEVKA
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHH
KKLFKDGDLSQNIELKPGDYVLVKESFF
HHHHCCCCCCCCEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7896702 [H]