| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is wzc [C]
Identifier: 197118155
GI number: 197118155
Start: 2040949
End: 2042448
Strand: Direct
Name: wzc [C]
Synonym: Gbem_1770
Alternate gene names: 197118155
Gene position: 2040949-2042448 (Clockwise)
Preceding gene: 197118154
Following gene: 197118156
Centisome position: 44.22
GC content: 59.13
Gene sequence:
>1500_bases ATGCAGTCGCCAGAGACCGAGTACAAGAAGTATCTGCAGCTGTTGATCAGCAACAAGGAGCGCTTTGTCGTCATCGCCCT GCTGCTGATGACCGTCGCCTTCGTGGTCAGTTTCGTGCTTCCGCGCAAGTACGAAGCCAGCAGCACTGTCTTCATCGAGA AGAACGTGATCAGCGAGCTGGTCAAGGGGATCACCGTTACCCCCTCCATGGAAGACACCATCAACGTCCTCACCTACGAG ATCACCAGCCGCACCCTCCTCACCAAGGTTATGGACAGCCTCGATCTGAATCTGGGCAAGAGCGACAGCGAAACCGAGGA GCTGATCAAGCAGCTGCAGCTTAGCACCAAGGTGAAGGTGAAGGACAAGAACCTCTTCACCATCTCCTTCACCCACACCA ACCCCCGCATCGCCAGGGACTACGTCAACACGCTGGTGCGCCTTTACATCGAAGGGAACATCTCCTCCAAACGCGGTGAG TCCTACGACGCCACCAAATTCCTCTCCGAGCAAATAGACACCTTCAACGCTAAGTTGCAGAAGGTCGAGAGCGAGGTCAA TGCCTACAAGCGGGACAAGGGGGGGGTCATTGCCATCGACGAGGGGAAACTCTTCCAGGAGATCAACGTCGCCCAGCAAA AGCTCTACGACCTCGAGCTAAGGCGCCATCAGTTGGAAGGGATGCGCCAGATCACCAGGAGGACAGGCGATCCCCTGCAG AGCAGACTCGCCGGGCTGCAGAAAAGGCTCGACGAACTGCTGGTGGAGTACACCGACAGTTTTCCCGAGGTGGTGAAGGT CAAGGGGGACATCGAGACGGTCAAGGCGCAGATTTCGGAGCGCCGGGGGCAGCCGTCCCAGCCGCTGGACCCGGGGGAGC TTGCCAAGATCGAGTCGGAGATCTCCGCCATCAAGATCACGGAAAGCGGCCTGAGGCGCTACATAGACACCAACCGCGCC CTGCTGCAGACCATCCCTTCGGCAAAGGCGGGGCTTGAGAAGCTGGAGCTGGAGAAGAAAAATCAAAAGAACATCTACGA CCAGCTCTTTGCCCGTCACGGGCAGTCCGAGGTCTCCAAGCAGATGGAGGTGCAGGACAAGTCCACCACCTTCCGCGTCG TCGACCCGGCCCTGCTCCCGGTCAAGCCTTCCAGTCCGGACCGGCTGAAGCTGATGCTGCTGGGGATGGTGGGGGGGGTG GCAGGAAGCTTCGCGCTGCTTTTCCTGGTGGACCATCTGAACATCACGGTCAAAGAGGTGGAGTTCGTAAAGGGGCTGGG GGTGCCGGTCCTGGCGGTTATTCCGAGGCTGCAGGACCCGGAGGTCGAGGCGAAGAGGCGCAGGCGCTCGCGGCTGATCC TGGGCTGCGCTTTGGTGTACTTCCTGGTGCTTATGGTTTTCCCTGGCATGGAACTCCTGGGGCTACCCTATATGGACAAG GTGCTGGACTTACTGTCCGGGCCGGAAGCCCGGTTACGGATCAAGGGGCTTTTGCAGTGA
Upstream 100 bases:
>100_bases GGCGATTACGTGCTGGTGAAGGAGAGTTTCTTCTAGCGCTTGGAAACATTTCTGCAGCATTTTTCGAATGGAAGCAGCAC CTTTTAAGGACAGGAGTTCT
Downstream 100 bases:
>100_bases CCGCCGCAGAAACGAGGTTGATATGAGCAGAATAGAGGAAGCGATGGAAAAGGCGGCGCGCATGAGGAATGGGATGGAGC CTCCCCCTCCCGAGTCTGTG
Product: polysaccharide chain length determinant protein
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: Lipopolysaccharide Biosynthesis Protein; Polysaccharide Chain Length Determinant Protein; Chain Length Determinant Family Protein; Chain Length Determinant Protein; Exopolysaccharide Biosynthesis Protein; Capsular Exopolysaccharide Family; Non-Specific Protein-Tyrosine Kinase; Chain Length Determinant Protein EpsF
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MQSPETEYKKYLQLLISNKERFVVIALLLMTVAFVVSFVLPRKYEASSTVFIEKNVISELVKGITVTPSMEDTINVLTYE ITSRTLLTKVMDSLDLNLGKSDSETEELIKQLQLSTKVKVKDKNLFTISFTHTNPRIARDYVNTLVRLYIEGNISSKRGE SYDATKFLSEQIDTFNAKLQKVESEVNAYKRDKGGVIAIDEGKLFQEINVAQQKLYDLELRRHQLEGMRQITRRTGDPLQ SRLAGLQKRLDELLVEYTDSFPEVVKVKGDIETVKAQISERRGQPSQPLDPGELAKIESEISAIKITESGLRRYIDTNRA LLQTIPSAKAGLEKLELEKKNQKNIYDQLFARHGQSEVSKQMEVQDKSTTFRVVDPALLPVKPSSPDRLKLMLLGMVGGV AGSFALLFLVDHLNITVKEVEFVKGLGVPVLAVIPRLQDPEVEAKRRRRSRLILGCALVYFLVLMVFPGMELLGLPYMDK VLDLLSGPEARLRIKGLLQ
Sequences:
>Translated_499_residues MQSPETEYKKYLQLLISNKERFVVIALLLMTVAFVVSFVLPRKYEASSTVFIEKNVISELVKGITVTPSMEDTINVLTYE ITSRTLLTKVMDSLDLNLGKSDSETEELIKQLQLSTKVKVKDKNLFTISFTHTNPRIARDYVNTLVRLYIEGNISSKRGE SYDATKFLSEQIDTFNAKLQKVESEVNAYKRDKGGVIAIDEGKLFQEINVAQQKLYDLELRRHQLEGMRQITRRTGDPLQ SRLAGLQKRLDELLVEYTDSFPEVVKVKGDIETVKAQISERRGQPSQPLDPGELAKIESEISAIKITESGLRRYIDTNRA LLQTIPSAKAGLEKLELEKKNQKNIYDQLFARHGQSEVSKQMEVQDKSTTFRVVDPALLPVKPSSPDRLKLMLLGMVGGV AGSFALLFLVDHLNITVKEVEFVKGLGVPVLAVIPRLQDPEVEAKRRRRSRLILGCALVYFLVLMVFPGMELLGLPYMDK VLDLLSGPEARLRIKGLLQ >Mature_499_residues MQSPETEYKKYLQLLISNKERFVVIALLLMTVAFVVSFVLPRKYEASSTVFIEKNVISELVKGITVTPSMEDTINVLTYE ITSRTLLTKVMDSLDLNLGKSDSETEELIKQLQLSTKVKVKDKNLFTISFTHTNPRIARDYVNTLVRLYIEGNISSKRGE SYDATKFLSEQIDTFNAKLQKVESEVNAYKRDKGGVIAIDEGKLFQEINVAQQKLYDLELRRHQLEGMRQITRRTGDPLQ SRLAGLQKRLDELLVEYTDSFPEVVKVKGDIETVKAQISERRGQPSQPLDPGELAKIESEISAIKITESGLRRYIDTNRA LLQTIPSAKAGLEKLELEKKNQKNIYDQLFARHGQSEVSKQMEVQDKSTTFRVVDPALLPVKPSSPDRLKLMLLGMVGGV AGSFALLFLVDHLNITVKEVEFVKGLGVPVLAVIPRLQDPEVEAKRRRRSRLILGCALVYFLVLMVFPGMELLGLPYMDK VLDLLSGPEARLRIKGLLQ
Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Inner membrane (Probable) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 56371; Mature: 56371
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSPETEYKKYLQLLISNKERFVVIALLLMTVAFVVSFVLPRKYEASSTVFIEKNVISEL CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH VKGITVTPSMEDTINVLTYEITSRTLLTKVMDSLDLNLGKSDSETEELIKQLQLSTKVKV HCCCCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEEEE KDKNLFTISFTHTNPRIARDYVNTLVRLYIEGNISSKRGESYDATKFLSEQIDTFNAKLQ ECCEEEEEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH KVESEVNAYKRDKGGVIAIDEGKLFQEINVAQQKLYDLELRRHQLEGMRQITRRTGDPLQ HHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SRLAGLQKRLDELLVEYTDSFPEVVKVKGDIETVKAQISERRGQPSQPLDPGELAKIESE HHHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH ISAIKITESGLRRYIDTNRALLQTIPSAKAGLEKLELEKKNQKNIYDQLFARHGQSEVSK HHHEEEEHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH QMEVQDKSTTFRVVDPALLPVKPSSPDRLKLMLLGMVGGVAGSFALLFLVDHLNITVKEV HHHCCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EFVKGLGVPVLAVIPRLQDPEVEAKRRRRSRLILGCALVYFLVLMVFPGMELLGLPYMDK HHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHH VLDLLSGPEARLRIKGLLQ HHHHHCCCCCEEEECCCCC >Mature Secondary Structure MQSPETEYKKYLQLLISNKERFVVIALLLMTVAFVVSFVLPRKYEASSTVFIEKNVISEL CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH VKGITVTPSMEDTINVLTYEITSRTLLTKVMDSLDLNLGKSDSETEELIKQLQLSTKVKV HCCCCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEEEE KDKNLFTISFTHTNPRIARDYVNTLVRLYIEGNISSKRGESYDATKFLSEQIDTFNAKLQ ECCEEEEEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH KVESEVNAYKRDKGGVIAIDEGKLFQEINVAQQKLYDLELRRHQLEGMRQITRRTGDPLQ HHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SRLAGLQKRLDELLVEYTDSFPEVVKVKGDIETVKAQISERRGQPSQPLDPGELAKIESE HHHHHHHHHHHHHHHHHHCCCHHHEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH ISAIKITESGLRRYIDTNRALLQTIPSAKAGLEKLELEKKNQKNIYDQLFARHGQSEVSK HHHEEEEHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH QMEVQDKSTTFRVVDPALLPVKPSSPDRLKLMLLGMVGGVAGSFALLFLVDHLNITVKEV HHHCCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EFVKGLGVPVLAVIPRLQDPEVEAKRRRRSRLILGCALVYFLVLMVFPGMELLGLPYMDK HHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHH VLDLLSGPEARLRIKGLLQ HHHHHCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA