Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is 197118111
Identifier: 197118111
GI number: 197118111
Start: 1990183
End: 1990665
Strand: Direct
Name: 197118111
Synonym: Gbem_1726
Alternate gene names: NA
Gene position: 1990183-1990665 (Clockwise)
Preceding gene: 197118110
Following gene: 197118112
Centisome position: 43.12
GC content: 64.18
Gene sequence:
>483_bases ATGGCAACAGCGATACCCGGAGACCTGATCGAGCTACTGAACGATCCCGCCGCGACCAAGGTGCTGGCCACCGTGGACGA GGACGGCGTTCCGCATCTGGCCGTCAAGCAGTCGCTTTACGTCGACGTCGCGGGGCGGTTGGTCTACACCGAACTTTTGG AGTCCTCGCGCAGCAACCGGAACCTGGTGCGGAGCATCTGGTTCGGCAAGAGCGTTTCGGTCATCGTGAGCGGAGCGGGT GGGCGGAGTTTCCAGGTGAAGGGGAAACCGGTGAAGACCCACATCTCGGGGCCGCTCTTCAGGAAGCACTACCTGGAGAT CCGCTCGCTCCTCGGTGACGTGGACGTCGCGGCCGTCTGGATCATCGAGCCGCAAGAGGTGATCGACGGCAGCTACGCTG CCCGCAGCGCGGAAGAGAGGGCGAAGTTCCCCTTCTTCGACCACCTGGACCGGCTGGTCAAACCCGCAGCCACGGCCGCC TGA
Upstream 100 bases:
>100_bases CTCGATCTTCCGTGGGAGCGGACCGACAAGGCGCAAGCCTTGCGCGATGCGGCTCGCGGCGCGGCAACCAACTGATAGAG GTTCCAGAAGGAGGGACATC
Downstream 100 bases:
>100_bases ACTGCTTTTCCCCTGGTTCCCAAGCTCCAACTTGGGAACCCAAGGCGACGCCAAGCTCCAGCTTGGCATCCGGGGGAAGC TGGAGCTTCGTACCGGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MATAIPGDLIELLNDPAATKVLATVDEDGVPHLAVKQSLYVDVAGRLVYTELLESSRSNRNLVRSIWFGKSVSVIVSGAG GRSFQVKGKPVKTHISGPLFRKHYLEIRSLLGDVDVAAVWIIEPQEVIDGSYAARSAEERAKFPFFDHLDRLVKPAATAA
Sequences:
>Translated_160_residues MATAIPGDLIELLNDPAATKVLATVDEDGVPHLAVKQSLYVDVAGRLVYTELLESSRSNRNLVRSIWFGKSVSVIVSGAG GRSFQVKGKPVKTHISGPLFRKHYLEIRSLLGDVDVAAVWIIEPQEVIDGSYAARSAEERAKFPFFDHLDRLVKPAATAA >Mature_159_residues ATAIPGDLIELLNDPAATKVLATVDEDGVPHLAVKQSLYVDVAGRLVYTELLESSRSNRNLVRSIWFGKSVSVIVSGAGG RSFQVKGKPVKTHISGPLFRKHYLEIRSLLGDVDVAAVWIIEPQEVIDGSYAARSAEERAKFPFFDHLDRLVKPAATAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17397; Mature: 17266
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAIPGDLIELLNDPAATKVLATVDEDGVPHLAVKQSLYVDVAGRLVYTELLESSRSNR CCCCCCHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH NLVRSIWFGKSVSVIVSGAGGRSFQVKGKPVKTHISGPLFRKHYLEIRSLLGDVDVAAVW HHHHHHHCCCCEEEEEECCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEE IIEPQEVIDGSYAARSAEERAKFPFFDHLDRLVKPAATAA EECHHHHHCCCHHHCCHHHHCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure ATAIPGDLIELLNDPAATKVLATVDEDGVPHLAVKQSLYVDVAGRLVYTELLESSRSNR CCCCCHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH NLVRSIWFGKSVSVIVSGAGGRSFQVKGKPVKTHISGPLFRKHYLEIRSLLGDVDVAAVW HHHHHHHCCCCEEEEEECCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEE IIEPQEVIDGSYAARSAEERAKFPFFDHLDRLVKPAATAA EECHHHHHCCCHHHCCHHHHCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA