Click here to switch to the map view.

The map label for this gene is 197118112

Identifier: 197118112

GI number: 197118112

Start: 1990922

End: 1992187

Strand: Direct

Name: 197118112

Synonym: Gbem_1727

Alternate gene names: NA

Gene position: 1990922-1992187 (Clockwise)

Preceding gene: 197118111

Following gene: 197118113

Centisome position: 43.14

GC content: 65.32

Gene sequence:

>1266_bases
ATGGCTAATCTTAATCTGGCAATAAAAGAAAACCGGCCGCTAAGCCGCGCCGAGGTTACCGAGAAATACCCGGACATCCC
GCCGCTGGTCATCCTGAAGGCGGACGTGCAGCGGCGCGGCGTGCACTACAGCGAGGCGGCCCTGGGCGCGCTCGACCTGG
AGCTTCACGCCACCACCGGCACCCACATCTTCGGCGCCCGCGACGGCAAAATAGCGGCGCGGCCCGAATCGCTCCTTCTG
CGCGACGGCTCCTCCATCATCACCACGCCGACGCCGCTGGAGCTGGACCCGTACCTGGTCGACCTCCACGAGGGAAGACC
CTTTCTCTTCGAGGACGGCGAACCGGTCGAGGAGGTGGATTACTGGCCCCGCCCCGACTTCTACGACAAGACCTCCTCTT
CGGGGACGCTGATGCAGAACGTGGTCAGCGCGCGCCCGCAGCGGCTCAACATCTTTCCCTACCGCTACTGCACCTTCTGG
AACAACGGCAACGGCTGCAGCTTCTGCGACATCGTGACCCAGATGAAGAAGGGGAAGGAGGAACTCGGCATCCCGGCGCG
CCTGGATCCGCTGGAGGTGAAGGAGGTGGTGTGGGAGGCGCTGCTGGAGCCGGGACGCTACGCCGCGCTCTTTCTCACCG
CAGGCTCCAACGTCGCCGGCAAGCGTGCCTTCGACGAGGAGGTGGACTACTACATCGAGATCCTGCAGCGGGTGGGGGAG
CTCTTCAGCGTCCCCAAGATCCCGAGCCAGCTGATCGGGACCGCATTCGACGACGGCCAGCTTGAGCGCCTGTACCGCGA
GACCCCGCTCACGAGCTATACCGCCGACATCGAGGTGCTGGGGGAGGAGCTCTTCAACCGGCACTGCCCGGGAAAGGCGG
AGTGGATCGGCTACAAGGAGTGGAAACGGCGGCTGGTCCGCGCGGTGGACATCTTCGGCCCCGGCCGCGTGAACACCGGG
CTTGTCGCCGGCGTCGAACTGACCAGCCCCGGAGGCTACAAAAATGAGGACGAGGCGCTGGCCCGGACCCTGGAAGAGGC
AGAGGACCTGGCCAGCCAGGGGGTGAGCACGGTCTACATCGTCTGGTCGCCGCGCCCCGGAACCGCGATCGGGGACCAGA
AAAACGCCTCTCTCGAATATTACGCGCGGCTCGCGGCCGGGCTGCACGGGTTGAGGGGGAAATACCGGCTCCCCATCGGC
TTCGACGATTATCGCCGCTGCGGCAACCATCCCGACAGCGACCTGTCGCGGCTGCACAACTTCTAA

Upstream 100 bases:

>100_bases
GCAAGTTCACCCACCCCCCTGCCCCCTCCCGTCCAGGGAGGGGGAGAGCTGGAAACGGCTTGATTTTGATAGTGCAGATA
GATCGGAGACGAGGACCCCC

Downstream 100 bases:

>100_bases
GGATTCAAAGGAGGATCACCATGAAGAGATCACGCATCACAATCGCCCTCCTCTTGCTTCTTGCCCTTTTCACCGCATCC
GTCGCGCGGGCCGAAGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Elongator /MiaB/NifB; Radical SAM Domain Protein; Fe-S Protein; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MANLNLAIKENRPLSRAEVTEKYPDIPPLVILKADVQRRGVHYSEAALGALDLELHATTGTHIFGARDGKIAARPESLLL
RDGSSIITTPTPLELDPYLVDLHEGRPFLFEDGEPVEEVDYWPRPDFYDKTSSSGTLMQNVVSARPQRLNIFPYRYCTFW
NNGNGCSFCDIVTQMKKGKEELGIPARLDPLEVKEVVWEALLEPGRYAALFLTAGSNVAGKRAFDEEVDYYIEILQRVGE
LFSVPKIPSQLIGTAFDDGQLERLYRETPLTSYTADIEVLGEELFNRHCPGKAEWIGYKEWKRRLVRAVDIFGPGRVNTG
LVAGVELTSPGGYKNEDEALARTLEEAEDLASQGVSTVYIVWSPRPGTAIGDQKNASLEYYARLAAGLHGLRGKYRLPIG
FDDYRRCGNHPDSDLSRLHNF

Sequences:

>Translated_421_residues
MANLNLAIKENRPLSRAEVTEKYPDIPPLVILKADVQRRGVHYSEAALGALDLELHATTGTHIFGARDGKIAARPESLLL
RDGSSIITTPTPLELDPYLVDLHEGRPFLFEDGEPVEEVDYWPRPDFYDKTSSSGTLMQNVVSARPQRLNIFPYRYCTFW
NNGNGCSFCDIVTQMKKGKEELGIPARLDPLEVKEVVWEALLEPGRYAALFLTAGSNVAGKRAFDEEVDYYIEILQRVGE
LFSVPKIPSQLIGTAFDDGQLERLYRETPLTSYTADIEVLGEELFNRHCPGKAEWIGYKEWKRRLVRAVDIFGPGRVNTG
LVAGVELTSPGGYKNEDEALARTLEEAEDLASQGVSTVYIVWSPRPGTAIGDQKNASLEYYARLAAGLHGLRGKYRLPIG
FDDYRRCGNHPDSDLSRLHNF
>Mature_420_residues
ANLNLAIKENRPLSRAEVTEKYPDIPPLVILKADVQRRGVHYSEAALGALDLELHATTGTHIFGARDGKIAARPESLLLR
DGSSIITTPTPLELDPYLVDLHEGRPFLFEDGEPVEEVDYWPRPDFYDKTSSSGTLMQNVVSARPQRLNIFPYRYCTFWN
NGNGCSFCDIVTQMKKGKEELGIPARLDPLEVKEVVWEALLEPGRYAALFLTAGSNVAGKRAFDEEVDYYIEILQRVGEL
FSVPKIPSQLIGTAFDDGQLERLYRETPLTSYTADIEVLGEELFNRHCPGKAEWIGYKEWKRRLVRAVDIFGPGRVNTGL
VAGVELTSPGGYKNEDEALARTLEEAEDLASQGVSTVYIVWSPRPGTAIGDQKNASLEYYARLAAGLHGLRGKYRLPIGF
DDYRRCGNHPDSDLSRLHNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47109; Mature: 46978

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLNLAIKENRPLSRAEVTEKYPDIPPLVILKADVQRRGVHYSEAALGALDLELHATTG
CCCCEEEEECCCCCCHHHHHHHCCCCCCEEEEECCHHHCCCCHHHHHCCEEEEEEEECCC
THIFGARDGKIAARPESLLLRDGSSIITTPTPLELDPYLVDLHEGRPFLFEDGEPVEEVD
CEEEECCCCCEEECCHHHEEECCCCEEECCCCCCCCCEEEEEECCCCEEECCCCCHHHCC
YWPRPDFYDKTSSSGTLMQNVVSARPQRLNIFPYRYCTFWNNGNGCSFCDIVTQMKKGKE
CCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECEEEEEEEEECCCCCHHHHHHHHHHCCHH
ELGIPARLDPLEVKEVVWEALLEPGRYAALFLTAGSNVAGKRAFDEEVDYYIEILQRVGE
HCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
LFSVPKIPSQLIGTAFDDGQLERLYRETPLTSYTADIEVLGEELFNRHCPGKAEWIGYKE
HHCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH
WKRRLVRAVDIFGPGRVNTGLVAGVELTSPGGYKNEDEALARTLEEAEDLASQGVSTVYI
HHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
VWSPRPGTAIGDQKNASLEYYARLAAGLHGLRGKYRLPIGFDDYRRCGNHPDSDLSRLHN
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHCCCCCHHHHHHCC
F
C
>Mature Secondary Structure 
ANLNLAIKENRPLSRAEVTEKYPDIPPLVILKADVQRRGVHYSEAALGALDLELHATTG
CCCEEEEECCCCCCHHHHHHHCCCCCCEEEEECCHHHCCCCHHHHHCCEEEEEEEECCC
THIFGARDGKIAARPESLLLRDGSSIITTPTPLELDPYLVDLHEGRPFLFEDGEPVEEVD
CEEEECCCCCEEECCHHHEEECCCCEEECCCCCCCCCEEEEEECCCCEEECCCCCHHHCC
YWPRPDFYDKTSSSGTLMQNVVSARPQRLNIFPYRYCTFWNNGNGCSFCDIVTQMKKGKE
CCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECEEEEEEEEECCCCCHHHHHHHHHHCCHH
ELGIPARLDPLEVKEVVWEALLEPGRYAALFLTAGSNVAGKRAFDEEVDYYIEILQRVGE
HCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
LFSVPKIPSQLIGTAFDDGQLERLYRETPLTSYTADIEVLGEELFNRHCPGKAEWIGYKE
HHCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH
WKRRLVRAVDIFGPGRVNTGLVAGVELTSPGGYKNEDEALARTLEEAEDLASQGVSTVYI
HHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
VWSPRPGTAIGDQKNASLEYYARLAAGLHGLRGKYRLPIGFDDYRRCGNHPDSDLSRLHN
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHCCCCCHHHHHHCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA