Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
---|---|
Accession | NC_011146 |
Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is coaE [H]
Identifier: 197117054
GI number: 197117054
Start: 779409
End: 780029
Strand: Reverse
Name: coaE [H]
Synonym: Gbem_0657
Alternate gene names: 197117054
Gene position: 780029-779409 (Counterclockwise)
Preceding gene: 197117058
Following gene: 197117052
Centisome position: 16.9
GC content: 67.63
Gene sequence:
>621_bases ATGCGCATCATAGGGCTCACTGGGGGAATAGCCTCGGGAAAAACGAGCGTGGCGAACCTCCTGGAACGGCTCGGCGCGCC GGTCGTCGACGCGGACCAACTGGCCCGGGAGGTGGTGGAACCGGGCGAGCGGGCGCTGGCGCAGATAGCGGAGAGCTTCG GCAAGGCGGTCTTGAATGCGGACGGAAGCCTGAACCGGGCGGCCCTTGGGGAGATCGTCTTCGCCGACCCGGAGAAAAGG CGAAAGCTTGAGTCGATCACCCACCCCGCCATCAAGGAGCGGGCCGAGGAGAAGCTCGCGCGGCTAAAGGCTGCGGGGGC GAAGACCGCCTTCTACGTGGCGCCGCTCCTGATCGAAGCGGGGATCACCTCTAGGGTGCACGAGGTCTGGGTGGTCTACC TCGACCACGAGACCCAGTTGGCCCGCCTCATGGCGCGGGACGGGCTCTCGCGCGAGGCGGCGCTTTCGCGCATCGCTTCG CAGATGCCGATGGAGGAGAAGAAGCGGCTGGGAAGGGTCGTGATCGACAACCGGGGGAGCAGGGAGGATCTGGAGGCAGA GGTGCTAAGGGTCTGGCGCGAGGAGATCGCGGCCGGGCAGCCCCCCCCCGCCGAACCGTAG
Upstream 100 bases:
>100_bases GAGGACCTGACCAACCCGACCTTCGCCCTGGGCGAACAGGGAATCATCTACTCATGAAACCAGCCTCACCCGACTACAAA TCGTTGCGCCGGAGTGAGCG
Downstream 100 bases:
>100_bases AACTGAAAAAGAAAAGGCCCCGCGAACGGGGCCTTTTCTTTATTTGTGGTAGCCGAGCTTGTGGGAGATCTCCTCGCCGG AGCGAATCACCAGCGGGATC
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase [H]
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MRIIGLTGGIASGKTSVANLLERLGAPVVDADQLAREVVEPGERALAQIAESFGKAVLNADGSLNRAALGEIVFADPEKR RKLESITHPAIKERAEEKLARLKAAGAKTAFYVAPLLIEAGITSRVHEVWVVYLDHETQLARLMARDGLSREAALSRIAS QMPMEEKKRLGRVVIDNRGSREDLEAEVLRVWREEIAAGQPPPAEP
Sequences:
>Translated_206_residues MRIIGLTGGIASGKTSVANLLERLGAPVVDADQLAREVVEPGERALAQIAESFGKAVLNADGSLNRAALGEIVFADPEKR RKLESITHPAIKERAEEKLARLKAAGAKTAFYVAPLLIEAGITSRVHEVWVVYLDHETQLARLMARDGLSREAALSRIAS QMPMEEKKRLGRVVIDNRGSREDLEAEVLRVWREEIAAGQPPPAEP >Mature_206_residues MRIIGLTGGIASGKTSVANLLERLGAPVVDADQLAREVVEPGERALAQIAESFGKAVLNADGSLNRAALGEIVFADPEKR RKLESITHPAIKERAEEKLARLKAAGAKTAFYVAPLLIEAGITSRVHEVWVVYLDHETQLARLMARDGLSREAALSRIAS QMPMEEKKRLGRVVIDNRGSREDLEAEVLRVWREEIAAGQPPPAEP
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A [H]
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain [H]
Homologues:
Organism=Homo sapiens, GI191252797, Length=180, Percent_Identity=42.2222222222222, Blast_Score=152, Evalue=2e-37, Organism=Homo sapiens, GI191252795, Length=180, Percent_Identity=42.2222222222222, Blast_Score=152, Evalue=2e-37, Organism=Homo sapiens, GI110227607, Length=192, Percent_Identity=35.9375, Blast_Score=118, Evalue=3e-27, Organism=Homo sapiens, GI205277394, Length=192, Percent_Identity=35.9375, Blast_Score=118, Evalue=4e-27, Organism=Homo sapiens, GI110227605, Length=192, Percent_Identity=35.9375, Blast_Score=118, Evalue=5e-27, Organism=Homo sapiens, GI110227603, Length=192, Percent_Identity=35.9375, Blast_Score=118, Evalue=5e-27, Organism=Homo sapiens, GI110227601, Length=192, Percent_Identity=35.9375, Blast_Score=118, Evalue=5e-27, Organism=Escherichia coli, GI1786292, Length=189, Percent_Identity=40.2116402116402, Blast_Score=132, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17554944, Length=193, Percent_Identity=38.860103626943, Blast_Score=154, Evalue=2e-38, Organism=Caenorhabditis elegans, GI25143409, Length=189, Percent_Identity=35.4497354497354, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6320402, Length=193, Percent_Identity=38.3419689119171, Blast_Score=123, Evalue=2e-29, Organism=Drosophila melanogaster, GI24644728, Length=193, Percent_Identity=41.4507772020725, Blast_Score=158, Evalue=3e-39, Organism=Drosophila melanogaster, GI24658602, Length=193, Percent_Identity=33.160621761658, Blast_Score=120, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001977 [H]
Pfam domain/function: PF01121 CoaE [H]
EC number: =2.7.1.24 [H]
Molecular weight: Translated: 22429; Mature: 22429
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: PS01294 COAE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIGLTGGIASGKTSVANLLERLGAPVVDADQLAREVVEPGERALAQIAESFGKAVLNA CEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC DGSLNRAALGEIVFADPEKRRKLESITHPAIKERAEEKLARLKAAGAKTAFYVAPLLIEA CCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH GITSRVHEVWVVYLDHETQLARLMARDGLSREAALSRIASQMPMEEKKRLGRVVIDNRGS HHHHHHHHHEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCEEECCCCC REDLEAEVLRVWREEIAAGQPPPAEP HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRIIGLTGGIASGKTSVANLLERLGAPVVDADQLAREVVEPGERALAQIAESFGKAVLNA CEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC DGSLNRAALGEIVFADPEKRRKLESITHPAIKERAEEKLARLKAAGAKTAFYVAPLLIEA CCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH GITSRVHEVWVVYLDHETQLARLMARDGLSREAALSRIASQMPMEEKKRLGRVVIDNRGS HHHHHHHHHEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCEEECCCCC REDLEAEVLRVWREEIAAGQPPPAEP HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA