Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is 197117058
Identifier: 197117058
GI number: 197117058
Start: 787046
End: 787600
Strand: Reverse
Name: 197117058
Synonym: Gbem_0662
Alternate gene names: NA
Gene position: 787600-787046 (Counterclockwise)
Preceding gene: 197117059
Following gene: 197117054
Centisome position: 17.07
GC content: 63.06
Gene sequence:
>555_bases ATGGAGCAGGCGGAGAACGATAAGACAGGGGTTATGGGGCAGGCGCCGTGCGACTCGCAGGCAGCGTTGCGCCAGGGACT TTTGGACGAGATAAAGCGCCTGAAGAGGTTCTCCAACCGGGGACTCTGGGCGCTTTCCCTGTTTCTGCTTTTGAGCATGC TGGCCTGGCGCGAGTTCTGGTTCCTCCCGACGCCCCAGGCCGTGATCCAGGCGCTGGGCGCGCCCCCGACGCCACTCATG ATCAGCCTGGTGCTGGTGCTCTACACCTTTTCCGCCATCATCCTGAGCCTCTCCCGGATGATGGCCGGGCTCAGGCACCC GAGCAGCTTCTGCCACGTCGGCTACTTGGCCGGCTTCTACCTCTTCTACTATTTCGCCGAGGCCTTGGCCGACAACTACT GGGCGGTCTTCGGCGCCGGGTTCACCATCCTCTGCCTGGAGAGCTACCGCATCTGGACCTTCTGCAGCGACCAGGTCGGG AAAAGGACCGAGCAGCTCGCCTTCCTGGACCGAAACGGCCGTCTCCCCCCCGAGGAAGATTCCCCCGAGTTGTAA
Upstream 100 bases:
>100_bases AACGAGATTGAGCAAGGATCCTTCAAGCCGGTCAACAACGCAGCCCCCTGCCGGAACAAGTAGCTGTAACTTAAGCCAGT GTCAGCAATCGAGTGTGTGA
Downstream 100 bases:
>100_bases ATTCCCTTCACCTCAGTTCTCGGCGACCTGCCGCTTCTCGTAGCTGCTGCAGGGGCGGCCGGTCTTCATGCGCGGCACGT CCAGCACCGTGTAGATGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MEQAENDKTGVMGQAPCDSQAALRQGLLDEIKRLKRFSNRGLWALSLFLLLSMLAWREFWFLPTPQAVIQALGAPPTPLM ISLVLVLYTFSAIILSLSRMMAGLRHPSSFCHVGYLAGFYLFYYFAEALADNYWAVFGAGFTILCLESYRIWTFCSDQVG KRTEQLAFLDRNGRLPPEEDSPEL
Sequences:
>Translated_184_residues MEQAENDKTGVMGQAPCDSQAALRQGLLDEIKRLKRFSNRGLWALSLFLLLSMLAWREFWFLPTPQAVIQALGAPPTPLM ISLVLVLYTFSAIILSLSRMMAGLRHPSSFCHVGYLAGFYLFYYFAEALADNYWAVFGAGFTILCLESYRIWTFCSDQVG KRTEQLAFLDRNGRLPPEEDSPEL >Mature_184_residues MEQAENDKTGVMGQAPCDSQAALRQGLLDEIKRLKRFSNRGLWALSLFLLLSMLAWREFWFLPTPQAVIQALGAPPTPLM ISLVLVLYTFSAIILSLSRMMAGLRHPSSFCHVGYLAGFYLFYYFAEALADNYWAVFGAGFTILCLESYRIWTFCSDQVG KRTEQLAFLDRNGRLPPEEDSPEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20830; Mature: 20830
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQAENDKTGVMGQAPCDSQAALRQGLLDEIKRLKRFSNRGLWALSLFLLLSMLAWREFW CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC FLPTPQAVIQALGAPPTPLMISLVLVLYTFSAIILSLSRMMAGLRHPSSFCHVGYLAGFY CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LFYYFAEALADNYWAVFGAGFTILCLESYRIWTFCSDQVGKRTEQLAFLDRNGRLPPEED HHHHHHHHHHCCHHHHHHCCHHEEHHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCCCCCC SPEL CCCC >Mature Secondary Structure MEQAENDKTGVMGQAPCDSQAALRQGLLDEIKRLKRFSNRGLWALSLFLLLSMLAWREFW CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC FLPTPQAVIQALGAPPTPLMISLVLVLYTFSAIILSLSRMMAGLRHPSSFCHVGYLAGFY CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LFYYFAEALADNYWAVFGAGFTILCLESYRIWTFCSDQVGKRTEQLAFLDRNGRLPPEED HHHHHHHHHHCCHHHHHHCCHHEEHHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCCCCCC SPEL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA