Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is tenI [H]
Identifier: 197117049
GI number: 197117049
Start: 774714
End: 775370
Strand: Reverse
Name: tenI [H]
Synonym: Gbem_0652
Alternate gene names: 197117049
Gene position: 775370-774714 (Counterclockwise)
Preceding gene: 197117050
Following gene: 197117048
Centisome position: 16.8
GC content: 66.82
Gene sequence:
>657_bases GTGAAAGAGCTGGAATCCCCCTGGATAGACTTCAACCTCTACCTGATTACCGGCAGGGAGGAGACGCAGGGGCGCCCCCT CGGGTACGTGGTCGAGGAAGCGCTTAAGGGCGGGGTGCGCGCGGTACAGTACCGCGACAAGGACGCCACCAGCAAGGAAC TCTACGAGACGGCCCACGAGCTGCGCCGCCTCACCTCGCGCTACGGCGCGAAACTCATCATCAACGACCGCGCCGACATA GCGCTCGCCGTCGACGCCGACGGCGTGCACATAGGAAGCGCCAGCATGCCCATCTACAAGGTGCGGCGGATCCTGGGAGA GCGGAAGCTGATCGGGGTCTCCTGCCACAACAAGGCGCAGGCCATCGCAGCCCAGGAGATGGGGGCCGACTTCATCACCT TCGGCCCGGTCTACTACACCCCCTCCAAGGCCCCCTACGGCGACCCGGTGGGGACCGCAAAGCTTCAGACAGTGGCGGGA CTTTTGCAGGTCCCGGTCTTCGCGCTCGGGGGGATCAAAAAGGAGAACTGCGCCGAGGCAGCCGGCTGCGGCGTGCGCGG CGTCGCGCTCATCTCCGCCGTCCTCTCCGCAGCCGACCCGCGCGAGGCGGCGAAGAAGCTCATCGCCCTTCTCCCCCCCC TGGAGCACGCCGACTGA
Upstream 100 bases:
>100_bases TGAACTGCGCGGTGCGCGCGGGGAGGCTCGCCTACCTGGCCGGGCGCATCCCGAGGAAGCTCTACGCCAGCGCCTCCTCC CCCTTGGCGGGGCTCATCGG
Downstream 100 bases:
>100_bases ACATGACCGGATCCCCCATCCATAGCGAGCTCCGCATCAACTCCTACGGCTCCTACCTGAGAAGGCGCTTTTCCTGCCGC GTCTCCAAGGTGAACGTGGA
Product: carboxythiazole phosphate tautomerase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKELESPWIDFNLYLITGREETQGRPLGYVVEEALKGGVRAVQYRDKDATSKELYETAHELRRLTSRYGAKLIINDRADI ALAVDADGVHIGSASMPIYKVRRILGERKLIGVSCHNKAQAIAAQEMGADFITFGPVYYTPSKAPYGDPVGTAKLQTVAG LLQVPVFALGGIKKENCAEAAGCGVRGVALISAVLSAADPREAAKKLIALLPPLEHAD
Sequences:
>Translated_218_residues MKELESPWIDFNLYLITGREETQGRPLGYVVEEALKGGVRAVQYRDKDATSKELYETAHELRRLTSRYGAKLIINDRADI ALAVDADGVHIGSASMPIYKVRRILGERKLIGVSCHNKAQAIAAQEMGADFITFGPVYYTPSKAPYGDPVGTAKLQTVAG LLQVPVFALGGIKKENCAEAAGCGVRGVALISAVLSAADPREAAKKLIALLPPLEHAD >Mature_218_residues MKELESPWIDFNLYLITGREETQGRPLGYVVEEALKGGVRAVQYRDKDATSKELYETAHELRRLTSRYGAKLIINDRADI ALAVDADGVHIGSASMPIYKVRRILGERKLIGVSCHNKAQAIAAQEMGADFITFGPVYYTPSKAPYGDPVGTAKLQTVAG LLQVPVFALGGIKKENCAEAAGCGVRGVALISAVLSAADPREAAKKLIALLPPLEHAD
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=181, Percent_Identity=30.939226519337, Blast_Score=77, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6325042, Length=222, Percent_Identity=34.2342342342342, Blast_Score=112, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 23461; Mature: 23461
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELESPWIDFNLYLITGREETQGRPLGYVVEEALKGGVRAVQYRDKDATSKELYETAHE CCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH LRRLTSRYGAKLIINDRADIALAVDADGVHIGSASMPIYKVRRILGERKLIGVSCHNKAQ HHHHHHHHCCEEEEECCCCEEEEEECCCEEECCCCCCHHHHHHHHCCCCEEEECCCCHHH AIAAQEMGADFITFGPVYYTPSKAPYGDPVGTAKLQTVAGLLQVPVFALGGIKKENCAEA HHHHHHHCCCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AGCGVRGVALISAVLSAADPREAAKKLIALLPPLEHAD HCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKELESPWIDFNLYLITGREETQGRPLGYVVEEALKGGVRAVQYRDKDATSKELYETAHE CCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH LRRLTSRYGAKLIINDRADIALAVDADGVHIGSASMPIYKVRRILGERKLIGVSCHNKAQ HHHHHHHHCCEEEEECCCCEEEEEECCCEEECCCCCCHHHHHHHHCCCCEEEECCCCHHH AIAAQEMGADFITFGPVYYTPSKAPYGDPVGTAKLQTVAGLLQVPVFALGGIKKENCAEA HHHHHHHCCCEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AGCGVRGVALISAVLSAADPREAAKKLIALLPPLEHAD HCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA