| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheC [H]
Identifier: 197117018
GI number: 197117018
Start: 741867
End: 742460
Strand: Reverse
Name: cheC [H]
Synonym: Gbem_0621
Alternate gene names: 197117018
Gene position: 742460-741867 (Counterclockwise)
Preceding gene: 197117019
Following gene: 197117017
Centisome position: 16.09
GC content: 64.48
Gene sequence:
>594_bases ATGCCCAATCCCGTCCTGCAACAGGCCGACCTGGCCGCACTGACCGAGGTGTGCAAACTCGGGATGGAACATGCCGCGAC CGCCCTGTCTCAGTTGATGGGGAAAGGGGTGTCCATCGAGGTCCCCCGCCTGAAGTTCGTCGACAGCGAGAAGCTGGCCG AACTGATCGAGCAGGAGCAGGAGGCGACGACGCTGCAGCTGCAGATCCTCGGCAACGTCCGGGGGAGCATCGTGATCCTC CTCCCCCAGCAGAACGCGCTGCGCGTCGTGGAACTTTTACTGGGGAAGGCGCCAAATCCCGAAGCACCGCTCTCGGAGCT GGAGCGTGCGACCCTGATGGAGGTCGGCAACATCCTCGCATCGGCCTGCCTGAACGCCCTGGGAAACACGCTCAAGATGA CGCTGCTCCCCTCGGTCCCGACCCTGGTGAGCGGAAGCGACGAATTCTTCGCGCGGATCCAGGAGCAGGGAGGCGAAAGC GAGAGCATCGTCATGATCGACGCCATGTTCTCCGTCGACGACGCCTGCTGCGGCGGGAGCATCTTCCTGGTACCGGCCGC CTCCTCGCTGGAGGCGATGCTGGCGGCGCTGTAA
Upstream 100 bases:
>100_bases GAGAAATCGTCACCATCCTCGACCTGGCCGGCCTGTTGTGAGTTAAGCGGCAAAACAGTTTCCCGGGCTTTTACCGGGGC AACGTCTAACGGAGGCTTAC
Downstream 100 bases:
>100_bases ACATAATGAAATGGTTGCGCGCCATCGGGTTGTGTGTCAGAATGCCCGGTCAAATCGCTGCCACAGCAACACACAGAAAG GTCCCGAGCCCTTGCCCGAG
Product: chemotaxis protein phosphatase CheC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPNPVLQQADLAALTEVCKLGMEHAATALSQLMGKGVSIEVPRLKFVDSEKLAELIEQEQEATTLQLQILGNVRGSIVIL LPQQNALRVVELLLGKAPNPEAPLSELERATLMEVGNILASACLNALGNTLKMTLLPSVPTLVSGSDEFFARIQEQGGES ESIVMIDAMFSVDDACCGGSIFLVPAASSLEAMLAAL
Sequences:
>Translated_197_residues MPNPVLQQADLAALTEVCKLGMEHAATALSQLMGKGVSIEVPRLKFVDSEKLAELIEQEQEATTLQLQILGNVRGSIVIL LPQQNALRVVELLLGKAPNPEAPLSELERATLMEVGNILASACLNALGNTLKMTLLPSVPTLVSGSDEFFARIQEQGGES ESIVMIDAMFSVDDACCGGSIFLVPAASSLEAMLAAL >Mature_196_residues PNPVLQQADLAALTEVCKLGMEHAATALSQLMGKGVSIEVPRLKFVDSEKLAELIEQEQEATTLQLQILGNVRGSIVILL PQQNALRVVELLLGKAPNPEAPLSELERATLMEVGNILASACLNALGNTLKMTLLPSVPTLVSGSDEFFARIQEQGGESE SIVMIDAMFSVDDACCGGSIFLVPAASSLEAMLAAL
Specific function: Involved in restoring normal CheY-P levels following the addition of attractant by increasing the rate of CheY-P hydrolysis. Is only 6% as active as FliY, which indicates that CheC may function after addition of an attractant to cope with increased levels
COG id: COG1776
COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007597 [H]
Pfam domain/function: PF04509 CheC [H]
EC number: NA
Molecular weight: Translated: 20829; Mature: 20697
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNPVLQQADLAALTEVCKLGMEHAATALSQLMGKGVSIEVPRLKFVDSEKLAELIEQEQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHHHHH EATTLQLQILGNVRGSIVILLPQQNALRVVELLLGKAPNPEAPLSELERATLMEVGNILA HHHEEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SACLNALGNTLKMTLLPSVPTLVSGSDEFFARIQEQGGESESIVMIDAMFSVDDACCGGS HHHHHHHCHHEEEEECCCCCHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC IFLVPAASSLEAMLAAL EEEEECCHHHHHHHHCC >Mature Secondary Structure PNPVLQQADLAALTEVCKLGMEHAATALSQLMGKGVSIEVPRLKFVDSEKLAELIEQEQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHHHHH EATTLQLQILGNVRGSIVILLPQQNALRVVELLLGKAPNPEAPLSELERATLMEVGNILA HHHEEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SACLNALGNTLKMTLLPSVPTLVSGSDEFFARIQEQGGESESIVMIDAMFSVDDACCGGS HHHHHHHCHHEEEEECCCCCHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC IFLVPAASSLEAMLAAL EEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2832368; 9384377 [H]