| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116968
Identifier: 197116968
GI number: 197116968
Start: 694102
End: 694665
Strand: Direct
Name: 197116968
Synonym: Gbem_0571
Alternate gene names: NA
Gene position: 694102-694665 (Clockwise)
Preceding gene: 197116963
Following gene: 197116970
Centisome position: 15.04
GC content: 59.22
Gene sequence:
>564_bases GTGGCAAAGCTGACATTGAACGAAAAGGAACATGGCGTCGCGGAAGATCTGGAACTGGATGCCGGGGACGAAGTCGCTGC CGCTATCGAGGAAGATTGGGACGATCCCATTCCCGACGACGATCTGTACTATGGGGATGAGCCGGAAGAGCTTCTCGACG ATGAACAGGATGACGCCGAGGAGCTGGTGTGGGACGGCGACGACCTAGCGAGGCCGGTGGTTCCGACGCCCGGATGTGCC GTCAGTTTCTTTGCCGACAACAAGCGTCATCACGCCATCTGTCTTGCCATCATCGGCGACGAGGTGCTCCTGGAGCATAA AGACGCCACCCGCTGTTTCCTCTTCATCGGCAAGGTGACGGAGATCGTGCCGCGCATCCGGCGCGGAGTCGTCTCTGCCA CCATAACCGTCGGAGCACTGAAAAAATGCCGCTACCACTCGGTTCCCAAGAAGTGGCTCCAGGAGATGATCCGGACGGGG CAGAGCTGGAAGGGGATGGAGGGTGGAGGAAAAGTGGCGCCCCCTCCGGGCGATCTTTTGAAGGGGCAGATGGACCTTTT TTGA
Upstream 100 bases:
>100_bases ATCCGCACGGTACAAAGCGATCCGTAAGCAACTTTGCAGGCGCGGTGTTACCTGGTTCAGGCACAAGCAACGACGCTGTG AGATTGGTAGGGGAAGAATT
Downstream 100 bases:
>100_bases GAGTTGGGAGAGACGCAGTGAGTTGCGTTTGGGCACAGCAGCAGGAGGGGGGCAGCTCTTCTTCTTATAAATGACGATGG CCGCGCGGGAATCACCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MAKLTLNEKEHGVAEDLELDAGDEVAAAIEEDWDDPIPDDDLYYGDEPEELLDDEQDDAEELVWDGDDLARPVVPTPGCA VSFFADNKRHHAICLAIIGDEVLLEHKDATRCFLFIGKVTEIVPRIRRGVVSATITVGALKKCRYHSVPKKWLQEMIRTG QSWKGMEGGGKVAPPPGDLLKGQMDLF
Sequences:
>Translated_187_residues MAKLTLNEKEHGVAEDLELDAGDEVAAAIEEDWDDPIPDDDLYYGDEPEELLDDEQDDAEELVWDGDDLARPVVPTPGCA VSFFADNKRHHAICLAIIGDEVLLEHKDATRCFLFIGKVTEIVPRIRRGVVSATITVGALKKCRYHSVPKKWLQEMIRTG QSWKGMEGGGKVAPPPGDLLKGQMDLF >Mature_186_residues AKLTLNEKEHGVAEDLELDAGDEVAAAIEEDWDDPIPDDDLYYGDEPEELLDDEQDDAEELVWDGDDLARPVVPTPGCAV SFFADNKRHHAICLAIIGDEVLLEHKDATRCFLFIGKVTEIVPRIRRGVVSATITVGALKKCRYHSVPKKWLQEMIRTGQ SWKGMEGGGKVAPPPGDLLKGQMDLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20727; Mature: 20595
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLTLNEKEHGVAEDLELDAGDEVAAAIEEDWDDPIPDDDLYYGDEPEELLDDEQDDAE CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHH ELVWDGDDLARPVVPTPGCAVSFFADNKRHHAICLAIIGDEVLLEHKDATRCFLFIGKVT HHHCCCCHHCCCCCCCCCCEEEEEECCCCCCEEEEEEECCHHEEECCCCCEEHHHHHHHH EIVPRIRRGVVSATITVGALKKCRYHSVPKKWLQEMIRTGQSWKGMEGGGKVAPPPGDLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH KGQMDLF CCCCCCC >Mature Secondary Structure AKLTLNEKEHGVAEDLELDAGDEVAAAIEEDWDDPIPDDDLYYGDEPEELLDDEQDDAE CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHH ELVWDGDDLARPVVPTPGCAVSFFADNKRHHAICLAIIGDEVLLEHKDATRCFLFIGKVT HHHCCCCHHCCCCCCCCCCEEEEEECCCCCCEEEEEEECCHHEEECCCCCEEHHHHHHHH EIVPRIRRGVVSATITVGALKKCRYHSVPKKWLQEMIRTGQSWKGMEGGGKVAPPPGDLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH KGQMDLF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA