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The map label for this gene is ytcJ [H]

Identifier: 197116918

GI number: 197116918

Start: 628964

End: 630772

Strand: Reverse

Name: ytcJ [H]

Synonym: Gbem_0520

Alternate gene names: 197116918

Gene position: 630772-628964 (Counterclockwise)

Preceding gene: 197116919

Following gene: 197116899

Centisome position: 13.67

GC content: 63.63

Gene sequence:

>1809_bases
ATGAAGGGACCAGAACTCGTTCTTTACAACGGCACCATAACCACACTCGACGAAAATAACCCCGAGGTGACGGCTTTAGC
CGTCTCCGGAGGCCGCGTCATCGCTATAGGCGGAGCGGAGCTGCTGCAAGAAGCCGACGAGGGCACCAAGAGGATAGACC
TCAAAAAGCACCGGGCGATTCCGGGGCTGAACGACTCCCACATCCACGTGATCCGTGGCGGGCTCAATTACAACATGGAG
CTGCGCTGGGATGGCGTTCCCTCGCTGCACGACGCGCTGGGGATGCTGCGCGAGCAGGCGCGGCGCACCCCGCCTCCGCA
GTGGGTGCGCGTGATCGGGGGGTGGACGGAGTTCCAATTCGCCGAGCGGCGCATGCCGACCCTGGAGGAAGTCAACCAGG
CGGCGCCGGACACCCCCGTGTTCATCCTCCACCTTTACGACCGGGCCCTGGTCAACAAAGCTGCGCTGCGTGCTCTTGGG
TACAACCGCGACACGCCGGACCCGCCGGGGTCCGAGATCCAGCGCGACAAGGCGGGGAATCCGACCGGGCTCCTGATAGC
GCGGCCGAACGCGATGTTGCTGTACGCAAGCCTCGCCAAGGGGCCGAAGCTTCCCTACCAGGACCAGCTCAACTCGACCC
GGCACTTCATGCGCGAATTGAACCGGCTGGGACTTACCAGCGCCATCGACGCGGGAGGCGGCTTCCAGAACTACCCTGAC
GACTACCGGGTCATCGAGGAGCTTTCCGCAAGCGGCCGGCTTACCCTGCGCATCGCCTACAACCTCTTCACGCAACACCC
CAAAAGCGAGTTGGAGGATTTCACCGAGTGGGTGCGGAGCTCGTCGCCCGGATCCGGGGACGATTTCTACCGCCACAACG
GGGCAGGAGAGATGCTGGTGTTCTCCGCCGCGGATTTCGAGGATTTTCTGGAACCGCGCCCCGATCTCCCGCCGATGATG
GAGCAGGAGTTGTCACAAGTCGTTCGCCTGCTGGCGGAGAACCGTTGGCCCTTCCGCCTCCATGCCACCTACAACGAGTC
GATCACCCGCTTCCTCGACGTCTTCGAGGCGGTGAACCGGGACGTCCCCTTCGACGGCCTGCGCTGGTTCTTCGACCATG
CAGAGACCATCACGCCGGAAAACCTGGAACGGGTGCGGAATCTGGGCGGGGGCATCGCCATTCAGGACCGGATGGCGTTC
CAGGGGGAGTATTTCAGGGAACGCTACGGCAGGGACGCCGCCGCGAATTCTCCCCCCTTCGCCAGGATGCTCGACATGGG
CATACCGGTTGGCGCCGGCACCGATGCCACCCGGGTCGCCAGCTATAACCCTTGGGTTGCCCTGTACTGGCTTGTCAGCG
GTCGCACGGTGGGAAAGATGCAGCTCTACCCCGAGCAAAACCGCATCGACAGGCTGGGCGCGCTGCGGTTGTACACGGTC
GGGAGCAGTTGGTTTTCGGGGGAGGAGGAAAAGAAGGGAAGGCTCGTGCCTGGACAGCTGGCAGACCTGGCGGTTCTTTC
AGCGGATTACTTCAAAGTCGCCGAGGAGGAAATTCCAGGCATCGAATCGGTGCTGACTATCGTGGGAGGAAAGGTGGTTC
ATGGCGCGGGAGATTTCGGCAGCCTGGCGCCGCCGCCTCTCCCGGTTAGCCCCGACTGGTCCCCGGTCGGCAGCTATGGC
GGATACCACAGCCGCGTTCACGAAGCGAACGCCTTCAGGTCATGCTGCCGCCACGCCATCGAAAAACCGTTGCGCACCGC
GCCAGGCTCGTTCCCCTGGGGGGGAGGTTGCGACTGCTTCGCCTTCTGA

Upstream 100 bases:

>100_bases
AACATGCGGGAGGGTACGGCCTGGGCATCAACTACGCCAAAAGCATGCTGGGAGAACATGCCAGCGAAGGCTAGAAGGGA
AAGGCCGGAGGAGAAAAGGT

Downstream 100 bases:

>100_bases
GGCGATATGCAGCAGACGACACTGTGAGAAAGGGGCGCCCGCGAACGGACGCTCCTTTTTTTCTGGCTCGCAAGCTCCAG
CTTGAAAACGAGAAAACGAG

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MKGPELVLYNGTITTLDENNPEVTALAVSGGRVIAIGGAELLQEADEGTKRIDLKKHRAIPGLNDSHIHVIRGGLNYNME
LRWDGVPSLHDALGMLREQARRTPPPQWVRVIGGWTEFQFAERRMPTLEEVNQAAPDTPVFILHLYDRALVNKAALRALG
YNRDTPDPPGSEIQRDKAGNPTGLLIARPNAMLLYASLAKGPKLPYQDQLNSTRHFMRELNRLGLTSAIDAGGGFQNYPD
DYRVIEELSASGRLTLRIAYNLFTQHPKSELEDFTEWVRSSSPGSGDDFYRHNGAGEMLVFSAADFEDFLEPRPDLPPMM
EQELSQVVRLLAENRWPFRLHATYNESITRFLDVFEAVNRDVPFDGLRWFFDHAETITPENLERVRNLGGGIAIQDRMAF
QGEYFRERYGRDAAANSPPFARMLDMGIPVGAGTDATRVASYNPWVALYWLVSGRTVGKMQLYPEQNRIDRLGALRLYTV
GSSWFSGEEEKKGRLVPGQLADLAVLSADYFKVAEEEIPGIESVLTIVGGKVVHGAGDFGSLAPPPLPVSPDWSPVGSYG
GYHSRVHEANAFRSCCRHAIEKPLRTAPGSFPWGGGCDCFAF

Sequences:

>Translated_602_residues
MKGPELVLYNGTITTLDENNPEVTALAVSGGRVIAIGGAELLQEADEGTKRIDLKKHRAIPGLNDSHIHVIRGGLNYNME
LRWDGVPSLHDALGMLREQARRTPPPQWVRVIGGWTEFQFAERRMPTLEEVNQAAPDTPVFILHLYDRALVNKAALRALG
YNRDTPDPPGSEIQRDKAGNPTGLLIARPNAMLLYASLAKGPKLPYQDQLNSTRHFMRELNRLGLTSAIDAGGGFQNYPD
DYRVIEELSASGRLTLRIAYNLFTQHPKSELEDFTEWVRSSSPGSGDDFYRHNGAGEMLVFSAADFEDFLEPRPDLPPMM
EQELSQVVRLLAENRWPFRLHATYNESITRFLDVFEAVNRDVPFDGLRWFFDHAETITPENLERVRNLGGGIAIQDRMAF
QGEYFRERYGRDAAANSPPFARMLDMGIPVGAGTDATRVASYNPWVALYWLVSGRTVGKMQLYPEQNRIDRLGALRLYTV
GSSWFSGEEEKKGRLVPGQLADLAVLSADYFKVAEEEIPGIESVLTIVGGKVVHGAGDFGSLAPPPLPVSPDWSPVGSYG
GYHSRVHEANAFRSCCRHAIEKPLRTAPGSFPWGGGCDCFAF
>Mature_602_residues
MKGPELVLYNGTITTLDENNPEVTALAVSGGRVIAIGGAELLQEADEGTKRIDLKKHRAIPGLNDSHIHVIRGGLNYNME
LRWDGVPSLHDALGMLREQARRTPPPQWVRVIGGWTEFQFAERRMPTLEEVNQAAPDTPVFILHLYDRALVNKAALRALG
YNRDTPDPPGSEIQRDKAGNPTGLLIARPNAMLLYASLAKGPKLPYQDQLNSTRHFMRELNRLGLTSAIDAGGGFQNYPD
DYRVIEELSASGRLTLRIAYNLFTQHPKSELEDFTEWVRSSSPGSGDDFYRHNGAGEMLVFSAADFEDFLEPRPDLPPMM
EQELSQVVRLLAENRWPFRLHATYNESITRFLDVFEAVNRDVPFDGLRWFFDHAETITPENLERVRNLGGGIAIQDRMAF
QGEYFRERYGRDAAANSPPFARMLDMGIPVGAGTDATRVASYNPWVALYWLVSGRTVGKMQLYPEQNRIDRLGALRLYTV
GSSWFSGEEEKKGRLVPGQLADLAVLSADYFKVAEEEIPGIESVLTIVGGKVVHGAGDFGSLAPPPLPVSPDWSPVGSYG
GYHSRVHEANAFRSCCRHAIEKPLRTAPGSFPWGGGCDCFAF

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 66928; Mature: 66928

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGPELVLYNGTITTLDENNPEVTALAVSGGRVIAIGGAELLQEADEGTKRIDLKKHRAI
CCCCCEEEECCEEEEECCCCCCEEEEEECCCEEEEECCHHHHHHHHCCCCEECHHHHCCC
PGLNDSHIHVIRGGLNYNMELRWDGVPSLHDALGMLREQARRTPPPQWVRVIGGWTEFQF
CCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
AERRMPTLEEVNQAAPDTPVFILHLYDRALVNKAALRALGYNRDTPDPPGSEIQRDKAGN
HHHCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCC
PTGLLIARPNAMLLYASLAKGPKLPYQDQLNSTRHFMRELNRLGLTSAIDAGGGFQNYPD
CCEEEEECCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCH
DYRVIEELSASGRLTLRIAYNLFTQHPKSELEDFTEWVRSSSPGSGDDFYRHNGAGEMLV
HHHHHHHHCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEE
FSAADFEDFLEPRPDLPPMMEQELSQVVRLLAENRWPFRLHATYNESITRFLDVFEAVNR
EECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCC
DVPFDGLRWFFDHAETITPENLERVRNLGGGIAIQDRMAFQGEYFRERYGRDAAANSPPF
CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECHHHHCHHHHHHHHCCCCCCCCCCH
ARMLDMGIPVGAGTDATRVASYNPWVALYWLVSGRTVGKMQLYPEQNRIDRLGALRLYTV
HHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCEEEEEEECCCHHHHHHHCCEEEEEE
GSSWFSGEEEKKGRLVPGQLADLAVLSADYFKVAEEEIPGIESVLTIVGGKVVHGAGDFG
CCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCC
SLAPPPLPVSPDWSPVGSYGGYHSRVHEANAFRSCCRHAIEKPLRTAPGSFPWGGGCDCF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AF
CC
>Mature Secondary Structure
MKGPELVLYNGTITTLDENNPEVTALAVSGGRVIAIGGAELLQEADEGTKRIDLKKHRAI
CCCCCEEEECCEEEEECCCCCCEEEEEECCCEEEEECCHHHHHHHHCCCCEECHHHHCCC
PGLNDSHIHVIRGGLNYNMELRWDGVPSLHDALGMLREQARRTPPPQWVRVIGGWTEFQF
CCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
AERRMPTLEEVNQAAPDTPVFILHLYDRALVNKAALRALGYNRDTPDPPGSEIQRDKAGN
HHHCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCC
PTGLLIARPNAMLLYASLAKGPKLPYQDQLNSTRHFMRELNRLGLTSAIDAGGGFQNYPD
CCEEEEECCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCH
DYRVIEELSASGRLTLRIAYNLFTQHPKSELEDFTEWVRSSSPGSGDDFYRHNGAGEMLV
HHHHHHHHCCCCCEEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEE
FSAADFEDFLEPRPDLPPMMEQELSQVVRLLAENRWPFRLHATYNESITRFLDVFEAVNR
EECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCC
DVPFDGLRWFFDHAETITPENLERVRNLGGGIAIQDRMAFQGEYFRERYGRDAAANSPPF
CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECHHHHCHHHHHHHHCCCCCCCCCCH
ARMLDMGIPVGAGTDATRVASYNPWVALYWLVSGRTVGKMQLYPEQNRIDRLGALRLYTV
HHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECCCEEEEEEECCCHHHHHHHCCEEEEEE
GSSWFSGEEEKKGRLVPGQLADLAVLSADYFKVAEEEIPGIESVLTIVGGKVVHGAGDFG
CCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCC
SLAPPPLPVSPDWSPVGSYGGYHSRVHEANAFRSCCRHAIEKPLRTAPGSFPWGGGCDCF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]