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The map label for this gene is ycaC [H]

Identifier: 197116919

GI number: 197116919

Start: 630799

End: 631461

Strand: Reverse

Name: ycaC [H]

Synonym: Gbem_0521

Alternate gene names: 197116919

Gene position: 631461-630799 (Counterclockwise)

Preceding gene: 197116923

Following gene: 197116918

Centisome position: 13.68

GC content: 60.48

Gene sequence:

>663_bases
ATGGCAAATTCAGCAGGAAATGGCGGAGCAAGCCCCCGCTTGTTGACACCCGGCAACTCGATGCTGCTCCTTATCGACCA
CCAGCCTCAGATGGCATTTGCATCTCACTCCATCGACATCCAGCTCCTCATCAACAACGTAACCGGCCTGGCTAAATCCG
CCAGGATCTTCAACGTCCCGGTTGTTCTCACCACCGTCGCCGCCAAGAGTTTCAGCGGCCCCATATTCGCCAACCTGCAG
GAGGTGTATCCGGAAACCGACCCCATCGACCGCACCACCATGAACTCCTGGGAGGACCCCAAGGTGGTGGAAGCGGTCCG
GCGGACCGATCGTAAAAAGCTGGTGATGGCGGCGCTTTGGACCGAGGTATGCCTTGCCACCGCCACCTTGTCCGCCTTGG
ATGACGGCTACGAGGTGTACATCGTCACCGACGCGTCGGCCGGGGTAACCAGCGAGGCGCACGAAATGGCCATCCGGAGG
ATGATCCAGGCAGGCGCGGTGCCGACGACATGGTTGCAGGTGCTCTTGGAATGGCAGAGGGACTGGGCGCGCCAAGAGAC
CTACAACGCGGTCATGGCCGTGGCCAAAGAACATGCGGGAGGGTACGGCCTGGGCATCAACTACGCCAAAAGCATGCTGG
GAGAACATGCCAGCGAAGGCTAG

Upstream 100 bases:

>100_bases
GCGAGACGGATCGAATCGAATTAAAATTGACTCACACTTAAAATACTATACGCTCTTTGAGTTTCAAACCCTACCGACAG
GAAATCAAAGGAGGCTAACC

Downstream 100 bases:

>100_bases
AAGGGAAAGGCCGGAGGAGAAAAGGTATGAAGGGACCAGAACTCGTTCTTTACAACGGCACCATAACCACACTCGACGAA
AATAACCCCGAGGTGACGGC

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MANSAGNGGASPRLLTPGNSMLLLIDHQPQMAFASHSIDIQLLINNVTGLAKSARIFNVPVVLTTVAAKSFSGPIFANLQ
EVYPETDPIDRTTMNSWEDPKVVEAVRRTDRKKLVMAALWTEVCLATATLSALDDGYEVYIVTDASAGVTSEAHEMAIRR
MIQAGAVPTTWLQVLLEWQRDWARQETYNAVMAVAKEHAGGYGLGINYAKSMLGEHASEG

Sequences:

>Translated_220_residues
MANSAGNGGASPRLLTPGNSMLLLIDHQPQMAFASHSIDIQLLINNVTGLAKSARIFNVPVVLTTVAAKSFSGPIFANLQ
EVYPETDPIDRTTMNSWEDPKVVEAVRRTDRKKLVMAALWTEVCLATATLSALDDGYEVYIVTDASAGVTSEAHEMAIRR
MIQAGAVPTTWLQVLLEWQRDWARQETYNAVMAVAKEHAGGYGLGINYAKSMLGEHASEG
>Mature_219_residues
ANSAGNGGASPRLLTPGNSMLLLIDHQPQMAFASHSIDIQLLINNVTGLAKSARIFNVPVVLTTVAAKSFSGPIFANLQE
VYPETDPIDRTTMNSWEDPKVVEAVRRTDRKKLVMAALWTEVCLATATLSALDDGYEVYIVTDASAGVTSEAHEMAIRRM
IQAGAVPTTWLQVLLEWQRDWARQETYNAVMAVAKEHAGGYGLGINYAKSMLGEHASEG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=169, Percent_Identity=36.6863905325444, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 23861; Mature: 23730

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSAGNGGASPRLLTPGNSMLLLIDHQPQMAFASHSIDIQLLINNVTGLAKSARIFNVP
CCCCCCCCCCCCEEECCCCCEEEEEECCCCHHHHCCCCEEEEEEEHHHHHHHCCEEEECH
VVLTTVAAKSFSGPIFANLQEVYPETDPIDRTTMNSWEDPKVVEAVRRTDRKKLVMAALW
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TEVCLATATLSALDDGYEVYIVTDASAGVTSEAHEMAIRRMIQAGAVPTTWLQVLLEWQR
HHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DWARQETYNAVMAVAKEHAGGYGLGINYAKSMLGEHASEG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ANSAGNGGASPRLLTPGNSMLLLIDHQPQMAFASHSIDIQLLINNVTGLAKSARIFNVP
CCCCCCCCCCCEEECCCCCEEEEEECCCCHHHHCCCCEEEEEEEHHHHHHHCCEEEECH
VVLTTVAAKSFSGPIFANLQEVYPETDPIDRTTMNSWEDPKVVEAVRRTDRKKLVMAALW
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TEVCLATATLSALDDGYEVYIVTDASAGVTSEAHEMAIRRMIQAGAVPTTWLQVLLEWQR
HHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DWARQETYNAVMAVAKEHAGGYGLGINYAKSMLGEHASEG
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]