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The map label for this gene is 195952998

Identifier: 195952998

GI number: 195952998

Start: 556428

End: 557486

Strand: Direct

Name: 195952998

Synonym: HY04AAS1_0623

Alternate gene names: NA

Gene position: 556428-557486 (Clockwise)

Preceding gene: 195952997

Following gene: 195952999

Centisome position: 35.68

GC content: 30.69

Gene sequence:

>1059_bases
ATGAATACTTTACAGCAAGCGGTAAATATATGGTATAGCAGTTCCAATACCACAAATATAATAATAGTTTTATGGATGCT
GTTAACCGTTATATTTTTATTTTTTTTAATACCATATTTGATAGTAGAAATTAAAAAAAGAAACAAAATAAAAGAAGATT
TTTTCAAAAAAGCCAAAGAATATGGGCTAACAGAGTTGGAAGCTGAATTGTTGTGGAAATATTCTACAGATTATAGATGG
AACGTATCTTTAGTCTTTAACAATAAAAAGGTTTTTGAAATAGTGGCATCAAAAATTCTGAATAAAGATACATCTTTTGC
GGATATTATAAACCAATTAAGGCATAAACTTGGTTTTGACCATGTACCGTGGTTCTTACCTATATCTACCACAAAAGACA
TAGAACTGTATCAAAGTGGAAAGATTTTGTTTAATGAAAGACCGTACGATGCTGTTGTATGGGATAAAGACGAAAAATAT
ATCTATCTAGCACTTTACAACATAAACAAGAGTCCTATCAAAATAGGAGATATTGTAACGTTTAGTTTTATCACTCAAGA
CTACGTTCAAACATCTTTTACTTCAAAAGTTATTGGAATATATGAAGATTCTGGTAGGATTTTATACAAGGTAGAGCATT
CAGACAAGGTTCTAAGGACACCTATCAGGGACGCAGTAAGGATAGAGTTAAGTTTAAAAGCATATATATATTTTCCTACA
TCCGAGGAACTGGAAGCTTATGAAAAAGAACAGATTTTACCGGAACCAGAAGAAGATAATCTTATAGAAGGAGTGATAAA
GGATTTGAGCATAGGAGGAACAAGGTTTTGCACTAGTATATCTTTGTCTGATCTTCAGAAAGTATTTGTAAAGTTTCGCA
TATACGATAAAGATTTAATAATATTTGGTACCATAAGAAATAAATTTGATGCTGTAGACCATTTTTGTTATGGTATAAAA
TTTGAAGATGTAACAAAAGAGCAAGAAGAGGACATAAGAAGCTACATAATAGAGCAACAAAGACTTTTAGTGAAATCTTA
CAAGTTAGGTGAGCTATGA

Upstream 100 bases:

>100_bases
TAGAAGTGGTCAAACAGGTCAAGTTGTTGTTGCTGCTGGAGAGGGTTGCATAGCTGCCATGGCTGCTGAAAGATATCTAC
AAAATTCCGAATAAGATCTA

Downstream 100 bases:

>100_bases
GCGTACAAAACCATATTGTATTGATAGGCGTTGGTAATATGGGCAATAAATATCTAAACGTACTAAAGCAATTAACCAAG
GATATAGTGCTTTGTGATAA

Product: type IV pilus assembly PilZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MNTLQQAVNIWYSSSNTTNIIIVLWMLLTVIFLFFLIPYLIVEIKKRNKIKEDFFKKAKEYGLTELEAELLWKYSTDYRW
NVSLVFNNKKVFEIVASKILNKDTSFADIINQLRHKLGFDHVPWFLPISTTKDIELYQSGKILFNERPYDAVVWDKDEKY
IYLALYNINKSPIKIGDIVTFSFITQDYVQTSFTSKVIGIYEDSGRILYKVEHSDKVLRTPIRDAVRIELSLKAYIYFPT
SEELEAYEKEQILPEPEEDNLIEGVIKDLSIGGTRFCTSISLSDLQKVFVKFRIYDKDLIIFGTIRNKFDAVDHFCYGIK
FEDVTKEQEEDIRSYIIEQQRLLVKSYKLGEL

Sequences:

>Translated_352_residues
MNTLQQAVNIWYSSSNTTNIIIVLWMLLTVIFLFFLIPYLIVEIKKRNKIKEDFFKKAKEYGLTELEAELLWKYSTDYRW
NVSLVFNNKKVFEIVASKILNKDTSFADIINQLRHKLGFDHVPWFLPISTTKDIELYQSGKILFNERPYDAVVWDKDEKY
IYLALYNINKSPIKIGDIVTFSFITQDYVQTSFTSKVIGIYEDSGRILYKVEHSDKVLRTPIRDAVRIELSLKAYIYFPT
SEELEAYEKEQILPEPEEDNLIEGVIKDLSIGGTRFCTSISLSDLQKVFVKFRIYDKDLIIFGTIRNKFDAVDHFCYGIK
FEDVTKEQEEDIRSYIIEQQRLLVKSYKLGEL
>Mature_352_residues
MNTLQQAVNIWYSSSNTTNIIIVLWMLLTVIFLFFLIPYLIVEIKKRNKIKEDFFKKAKEYGLTELEAELLWKYSTDYRW
NVSLVFNNKKVFEIVASKILNKDTSFADIINQLRHKLGFDHVPWFLPISTTKDIELYQSGKILFNERPYDAVVWDKDEKY
IYLALYNINKSPIKIGDIVTFSFITQDYVQTSFTSKVIGIYEDSGRILYKVEHSDKVLRTPIRDAVRIELSLKAYIYFPT
SEELEAYEKEQILPEPEEDNLIEGVIKDLSIGGTRFCTSISLSDLQKVFVKFRIYDKDLIIFGTIRNKFDAVDHFCYGIK
FEDVTKEQEEDIRSYIIEQQRLLVKSYKLGEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PilZ domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009875 [H]

Pfam domain/function: PF07238 PilZ [H]

EC number: NA

Molecular weight: Translated: 41442; Mature: 41442

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLQQAVNIWYSSSNTTNIIIVLWMLLTVIFLFFLIPYLIVEIKKRNKIKEDFFKKAKE
CCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YGLTELEAELLWKYSTDYRWNVSLVFNNKKVFEIVASKILNKDTSFADIINQLRHKLGFD
CCCHHHHHHHHEEECCCEEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
HVPWFLPISTTKDIELYQSGKILFNERPYDAVVWDKDEKYIYLALYNINKSPIKIGDIVT
CCCEEEECCCCCCEEEEECCCEEECCCCCCEEEEECCCCEEEEEEEECCCCCEEECCEEE
FSFITQDYVQTSFTSKVIGIYEDSGRILYKVEHSDKVLRTPIRDAVRIELSLKAYIYFPT
HHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCHHHCCCCCEEEEEEEEEEEEECCC
SEELEAYEKEQILPEPEEDNLIEGVIKDLSIGGTRFCTSISLSDLQKVFVKFRIYDKDLI
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHEEEEECCCEE
IFGTIRNKFDAVDHFCYGIKFEDVTKEQEEDIRSYIIEQQRLLVKSYKLGEL
EEEECCHHHHHHHHHHCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNTLQQAVNIWYSSSNTTNIIIVLWMLLTVIFLFFLIPYLIVEIKKRNKIKEDFFKKAKE
CCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YGLTELEAELLWKYSTDYRWNVSLVFNNKKVFEIVASKILNKDTSFADIINQLRHKLGFD
CCCHHHHHHHHEEECCCEEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
HVPWFLPISTTKDIELYQSGKILFNERPYDAVVWDKDEKYIYLALYNINKSPIKIGDIVT
CCCEEEECCCCCCEEEEECCCEEECCCCCCEEEEECCCCEEEEEEEECCCCCEEECCEEE
FSFITQDYVQTSFTSKVIGIYEDSGRILYKVEHSDKVLRTPIRDAVRIELSLKAYIYFPT
HHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCHHHCCCCCEEEEEEEEEEEEECCC
SEELEAYEKEQILPEPEEDNLIEGVIKDLSIGGTRFCTSISLSDLQKVFVKFRIYDKDLI
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHEEEEECCCEE
IFGTIRNKFDAVDHFCYGIKFEDVTKEQEEDIRSYIIEQQRLLVKSYKLGEL
EEEECCHHHHHHHHHHCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]