Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952999

Identifier: 195952999

GI number: 195952999

Start: 557483

End: 558304

Strand: Direct

Name: 195952999

Synonym: HY04AAS1_0624

Alternate gene names: NA

Gene position: 557483-558304 (Clockwise)

Preceding gene: 195952998

Following gene: 195953000

Centisome position: 35.75

GC content: 31.63

Gene sequence:

>822_bases
ATGAGCGTACAAAACCATATTGTATTGATAGGCGTTGGTAATATGGGCAATAAATATCTAAACGTACTAAAGCAATTAAC
CAAGGATATAGTGCTTTGTGATAAAGACATTAATAAAATATTAGATAAAGGTTTTCCCTATGTATGCGATATAGGTGATT
TAAATTCATCTATTTCTAAGGCTATCATAGCAACAGACCCTACTCAACATGTAAATATAGCAAAAATGTTGTTGTTAAAC
ACTGGGGCTGATATACTTATAGAAAAACCACCAGCCACATCTTATGAAGAGTTTATAAGCTTGACAGAATTTAAGAATAA
AATATGGATATCAGAAATTGAAAGATTCTCGCTTTGCATAAAAGAATTTCCAAAACACATAAAGCCAAAATATATAGAGA
TAAAAAGACTAAACAAAGGAAGAGGTTATATAAATCCTATATGGGATTTAGCTTGGCATGATTTGTACAATTTATTGTAT
TTATTTGGAGATGTTAGAATAGAAAACGTTAGAGTTGGGCACGTCTGGGAGCTAACAGGAAAAGTAAACAACGAAATACC
GTTTCAGTTGCAAGTAGCTTGGAATCACCATTTTATAGATAGGAGTTGGACTGTTCATACCAACAAAGGAAGCATTTTTA
TGAATTTTGCAGATGAAGAAATTATCTTAGAGAATGGGACTTCCTATACGAGAAAAGACGGCAACAAGCTTATGGATATG
TTAGGGCAGTTTTTAGATGGCTTAGAAGATGAATCTTTTGATAGAGCGGCTAAAATATTAAAAATGTTAGATAATATAAA
AGATGAAATTGGTAGTATATAA

Upstream 100 bases:

>100_bases
TAAAATTTGAAGATGTAACAAAAGAGCAAGAAGAGGACATAAGAAGCTACATAATAGAGCAACAAAGACTTTTAGTGAAA
TCTTACAAGTTAGGTGAGCT

Downstream 100 bases:

>100_bases
AAAGAATGATGTAATATTTTCAATGCTTTTTAAAAGTAACGAACTTTTAGATATTAAAGTAGACAATTTAAACGATCCTG
AATATAGCTCATCTATTTTT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSVQNHIVLIGVGNMGNKYLNVLKQLTKDIVLCDKDINKILDKGFPYVCDIGDLNSSISKAIIATDPTQHVNIAKMLLLN
TGADILIEKPPATSYEEFISLTEFKNKIWISEIERFSLCIKEFPKHIKPKYIEIKRLNKGRGYINPIWDLAWHDLYNLLY
LFGDVRIENVRVGHVWELTGKVNNEIPFQLQVAWNHHFIDRSWTVHTNKGSIFMNFADEEIILENGTSYTRKDGNKLMDM
LGQFLDGLEDESFDRAAKILKMLDNIKDEIGSI

Sequences:

>Translated_273_residues
MSVQNHIVLIGVGNMGNKYLNVLKQLTKDIVLCDKDINKILDKGFPYVCDIGDLNSSISKAIIATDPTQHVNIAKMLLLN
TGADILIEKPPATSYEEFISLTEFKNKIWISEIERFSLCIKEFPKHIKPKYIEIKRLNKGRGYINPIWDLAWHDLYNLLY
LFGDVRIENVRVGHVWELTGKVNNEIPFQLQVAWNHHFIDRSWTVHTNKGSIFMNFADEEIILENGTSYTRKDGNKLMDM
LGQFLDGLEDESFDRAAKILKMLDNIKDEIGSI
>Mature_272_residues
SVQNHIVLIGVGNMGNKYLNVLKQLTKDIVLCDKDINKILDKGFPYVCDIGDLNSSISKAIIATDPTQHVNIAKMLLLNT
GADILIEKPPATSYEEFISLTEFKNKIWISEIERFSLCIKEFPKHIKPKYIEIKRLNKGRGYINPIWDLAWHDLYNLLYL
FGDVRIENVRVGHVWELTGKVNNEIPFQLQVAWNHHFIDRSWTVHTNKGSIFMNFADEEIILENGTSYTRKDGNKLMDML
GQFLDGLEDESFDRAAKILKMLDNIKDEIGSI

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31399; Mature: 31267

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQNHIVLIGVGNMGNKYLNVLKQLTKDIVLCDKDINKILDKGFPYVCDIGDLNSSISK
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEECHHHHHHHHCCCCEEEECCCCCHHHHC
AIIATDPTQHVNIAKMLLLNTGADILIEKPPATSYEEFISLTEFKNKIWISEIERFSLCI
EEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KEFPKHIKPKYIEIKRLNKGRGYINPIWDLAWHDLYNLLYLFGDVRIENVRVGHVWELTG
HHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECC
KVNNEIPFQLQVAWNHHFIDRSWTVHTNKGSIFMNFADEEIILENGTSYTRKDGNKLMDM
CCCCCCCEEEEEEECEEEECCEEEEEECCCEEEEEECCCEEEEECCCCCHHCCHHHHHHH
LGQFLDGLEDESFDRAAKILKMLDNIKDEIGSI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVQNHIVLIGVGNMGNKYLNVLKQLTKDIVLCDKDINKILDKGFPYVCDIGDLNSSISK
CCCCCEEEEEECCCCHHHHHHHHHHHHHHEEECHHHHHHHHCCCCEEEECCCCCHHHHC
AIIATDPTQHVNIAKMLLLNTGADILIEKPPATSYEEFISLTEFKNKIWISEIERFSLCI
EEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KEFPKHIKPKYIEIKRLNKGRGYINPIWDLAWHDLYNLLYLFGDVRIENVRVGHVWELTG
HHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECC
KVNNEIPFQLQVAWNHHFIDRSWTVHTNKGSIFMNFADEEIILENGTSYTRKDGNKLMDM
CCCCCCCEEEEEEECEEEECCEEEEEECCCEEEEEECCCEEEEECCCCCHHCCHHHHHHH
LGQFLDGLEDESFDRAAKILKMLDNIKDEIGSI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA