Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
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Accession | NC_011126 |
Length | 1,559,514 |
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The map label for this gene is 195952999
Identifier: 195952999
GI number: 195952999
Start: 557483
End: 558304
Strand: Direct
Name: 195952999
Synonym: HY04AAS1_0624
Alternate gene names: NA
Gene position: 557483-558304 (Clockwise)
Preceding gene: 195952998
Following gene: 195953000
Centisome position: 35.75
GC content: 31.63
Gene sequence:
>822_bases ATGAGCGTACAAAACCATATTGTATTGATAGGCGTTGGTAATATGGGCAATAAATATCTAAACGTACTAAAGCAATTAAC CAAGGATATAGTGCTTTGTGATAAAGACATTAATAAAATATTAGATAAAGGTTTTCCCTATGTATGCGATATAGGTGATT TAAATTCATCTATTTCTAAGGCTATCATAGCAACAGACCCTACTCAACATGTAAATATAGCAAAAATGTTGTTGTTAAAC ACTGGGGCTGATATACTTATAGAAAAACCACCAGCCACATCTTATGAAGAGTTTATAAGCTTGACAGAATTTAAGAATAA AATATGGATATCAGAAATTGAAAGATTCTCGCTTTGCATAAAAGAATTTCCAAAACACATAAAGCCAAAATATATAGAGA TAAAAAGACTAAACAAAGGAAGAGGTTATATAAATCCTATATGGGATTTAGCTTGGCATGATTTGTACAATTTATTGTAT TTATTTGGAGATGTTAGAATAGAAAACGTTAGAGTTGGGCACGTCTGGGAGCTAACAGGAAAAGTAAACAACGAAATACC GTTTCAGTTGCAAGTAGCTTGGAATCACCATTTTATAGATAGGAGTTGGACTGTTCATACCAACAAAGGAAGCATTTTTA TGAATTTTGCAGATGAAGAAATTATCTTAGAGAATGGGACTTCCTATACGAGAAAAGACGGCAACAAGCTTATGGATATG TTAGGGCAGTTTTTAGATGGCTTAGAAGATGAATCTTTTGATAGAGCGGCTAAAATATTAAAAATGTTAGATAATATAAA AGATGAAATTGGTAGTATATAA
Upstream 100 bases:
>100_bases TAAAATTTGAAGATGTAACAAAAGAGCAAGAAGAGGACATAAGAAGCTACATAATAGAGCAACAAAGACTTTTAGTGAAA TCTTACAAGTTAGGTGAGCT
Downstream 100 bases:
>100_bases AAAGAATGATGTAATATTTTCAATGCTTTTTAAAAGTAACGAACTTTTAGATATTAAAGTAGACAATTTAAACGATCCTG AATATAGCTCATCTATTTTT
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSVQNHIVLIGVGNMGNKYLNVLKQLTKDIVLCDKDINKILDKGFPYVCDIGDLNSSISKAIIATDPTQHVNIAKMLLLN TGADILIEKPPATSYEEFISLTEFKNKIWISEIERFSLCIKEFPKHIKPKYIEIKRLNKGRGYINPIWDLAWHDLYNLLY LFGDVRIENVRVGHVWELTGKVNNEIPFQLQVAWNHHFIDRSWTVHTNKGSIFMNFADEEIILENGTSYTRKDGNKLMDM LGQFLDGLEDESFDRAAKILKMLDNIKDEIGSI
Sequences:
>Translated_273_residues MSVQNHIVLIGVGNMGNKYLNVLKQLTKDIVLCDKDINKILDKGFPYVCDIGDLNSSISKAIIATDPTQHVNIAKMLLLN TGADILIEKPPATSYEEFISLTEFKNKIWISEIERFSLCIKEFPKHIKPKYIEIKRLNKGRGYINPIWDLAWHDLYNLLY LFGDVRIENVRVGHVWELTGKVNNEIPFQLQVAWNHHFIDRSWTVHTNKGSIFMNFADEEIILENGTSYTRKDGNKLMDM LGQFLDGLEDESFDRAAKILKMLDNIKDEIGSI >Mature_272_residues SVQNHIVLIGVGNMGNKYLNVLKQLTKDIVLCDKDINKILDKGFPYVCDIGDLNSSISKAIIATDPTQHVNIAKMLLLNT GADILIEKPPATSYEEFISLTEFKNKIWISEIERFSLCIKEFPKHIKPKYIEIKRLNKGRGYINPIWDLAWHDLYNLLYL FGDVRIENVRVGHVWELTGKVNNEIPFQLQVAWNHHFIDRSWTVHTNKGSIFMNFADEEIILENGTSYTRKDGNKLMDML GQFLDGLEDESFDRAAKILKMLDNIKDEIGSI
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31399; Mature: 31267
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQNHIVLIGVGNMGNKYLNVLKQLTKDIVLCDKDINKILDKGFPYVCDIGDLNSSISK CCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEECHHHHHHHHCCCCEEEECCCCCHHHHC AIIATDPTQHVNIAKMLLLNTGADILIEKPPATSYEEFISLTEFKNKIWISEIERFSLCI EEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KEFPKHIKPKYIEIKRLNKGRGYINPIWDLAWHDLYNLLYLFGDVRIENVRVGHVWELTG HHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECC KVNNEIPFQLQVAWNHHFIDRSWTVHTNKGSIFMNFADEEIILENGTSYTRKDGNKLMDM CCCCCCCEEEEEEECEEEECCEEEEEECCCEEEEEECCCEEEEECCCCCHHCCHHHHHHH LGQFLDGLEDESFDRAAKILKMLDNIKDEIGSI HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVQNHIVLIGVGNMGNKYLNVLKQLTKDIVLCDKDINKILDKGFPYVCDIGDLNSSISK CCCCCEEEEEECCCCHHHHHHHHHHHHHHEEECHHHHHHHHCCCCEEEECCCCCHHHHC AIIATDPTQHVNIAKMLLLNTGADILIEKPPATSYEEFISLTEFKNKIWISEIERFSLCI EEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KEFPKHIKPKYIEIKRLNKGRGYINPIWDLAWHDLYNLLYLFGDVRIENVRVGHVWELTG HHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECC KVNNEIPFQLQVAWNHHFIDRSWTVHTNKGSIFMNFADEEIILENGTSYTRKDGNKLMDM CCCCCCCEEEEEEECEEEECCEEEEEECCCEEEEEECCCEEEEECCCCCHHCCHHHHHHH LGQFLDGLEDESFDRAAKILKMLDNIKDEIGSI HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA