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The map label for this gene is pspD [H]

Identifier: 194735436

GI number: 194735436

Start: 1754038

End: 1754256

Strand: Reverse

Name: pspD [H]

Synonym: SeSA_A1812

Alternate gene names: 194735436

Gene position: 1754256-1754038 (Counterclockwise)

Preceding gene: 194737022

Following gene: 194734356

Centisome position: 37.25

GC content: 56.16

Gene sequence:

>219_bases
ATGAATACTCGCTGGCAACGCGCCGGGCAGAAGGTGAAGCCCGGCTTCAAAATAGCAGGTAAGCTGGTTCTGTTGACCGC
GTTACGCTACGGGCCTGCCGGCGTGGCGGGATGGGCGGTAAAATCCGTCGCCCGTCGTCCGCTAAAAATGTTGCTGGCGT
TTGCGCTGGAGCCAGTACTTCGTAAGGTGGCGAATAAAATTTCGCAGCGTTACAAATAG

Upstream 100 bases:

>100_bases
GAAAAGCGTTTGCGAGAAATGGAACGCTACGTCACGTCAGATACGTTCACACTGCGTAGTCGTTTCCGTCAACTGTAAGT
GATATATCGGGAAGGTGAAG

Downstream 100 bases:

>100_bases
CGAGTCTGGTCATAATATTTCGTTAAGCTCTGGCGTATAGTGTGTGCGAAATACATTACGTGTCAGGACGGAAGTATGTT
GAAAAAAGGAATATTTGCGT

Product: peripheral inner membrane phage-shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MNTRWQRAGQKVKPGFKIAGKLVLLTALRYGPAGVAGWAVKSVARRPLKMLLAFALEPVLRKVANKISQRYK

Sequences:

>Translated_72_residues
MNTRWQRAGQKVKPGFKIAGKLVLLTALRYGPAGVAGWAVKSVARRPLKMLLAFALEPVLRKVANKISQRYK
>Mature_72_residues
MNTRWQRAGQKVKPGFKIAGKLVLLTALRYGPAGVAGWAVKSVARRPLKMLLAFALEPVLRKVANKISQRYK

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspD family [H]

Homologues:

Organism=Escherichia coli, GI1787565, Length=72, Percent_Identity=86.1111111111111, Blast_Score=128, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014321 [H]

Pfam domain/function: PF09584 Phageshock_PspD [H]

EC number: NA

Molecular weight: Translated: 8019; Mature: 8019

Theoretical pI: Translated: 12.43; Mature: 12.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRWQRAGQKVKPGFKIAGKLVLLTALRYGPAGVAGWAVKSVARRPLKMLLAFALEPVL
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RKVANKISQRYK
HHHHHHHHHCCC
>Mature Secondary Structure
MNTRWQRAGQKVKPGFKIAGKLVLLTALRYGPAGVAGWAVKSVARRPLKMLLAFALEPVL
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RKVANKISQRYK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]