Click here to switch to the map view.

The map label for this gene is pspC [H]

Identifier: 194737022

GI number: 194737022

Start: 1754279

End: 1754638

Strand: Reverse

Name: pspC [H]

Synonym: SeSA_A1813

Alternate gene names: 194737022

Gene position: 1754638-1754279 (Counterclockwise)

Preceding gene: 194736422

Following gene: 194735436

Centisome position: 37.26

GC content: 51.94

Gene sequence:

>360_bases
ATGGGTGGAATCAATCTGAATAAAAAACTATGGCGTATGCCGCAAAAGGGCATGGTACGTGGCGTTTGCGCCGGGATCGC
CGACTACCTTGATGTACCGGTAAAACTGGTGCGTATTCTGGTCGTGCTGTCGATTTTCTTTGGGCTGGCGTTTTTTACCG
TAGTGGCCTATATCGTTCTGTCTTTTGTACTGGACCCTATGCCGGATAATCTGGCCGCAGGCAAACCGCAGCCGACCAGC
GGCGAACTGCTGGATACCGTAGACAGAGAGCTTGCCGCAGGCGAAAAGCGTTTGCGAGAAATGGAACGCTACGTCACGTC
AGATACGTTCACACTGCGTAGTCGTTTCCGTCAACTGTAA

Upstream 100 bases:

>100_bases
GCTTACTGCAACTCACAGACGATGCGCAACGTATGCGCGAGCGCATTCAGGCGCTGGAAGACATTCTTGATGCAGAGCAT
CCGAACTGGAGAGAGCGCTA

Downstream 100 bases:

>100_bases
GTGATATATCGGGAAGGTGAAGATGAATACTCGCTGGCAACGCGCCGGGCAGAAGGTGAAGCCCGGCTTCAAAATAGCAG
GTAAGCTGGTTCTGTTGACC

Product: DNA-binding transcriptional activator PspC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MGGINLNKKLWRMPQKGMVRGVCAGIADYLDVPVKLVRILVVLSIFFGLAFFTVVAYIVLSFVLDPMPDNLAAGKPQPTS
GELLDTVDRELAAGEKRLREMERYVTSDTFTLRSRFRQL

Sequences:

>Translated_119_residues
MGGINLNKKLWRMPQKGMVRGVCAGIADYLDVPVKLVRILVVLSIFFGLAFFTVVAYIVLSFVLDPMPDNLAAGKPQPTS
GELLDTVDRELAAGEKRLREMERYVTSDTFTLRSRFRQL
>Mature_118_residues
GGINLNKKLWRMPQKGMVRGVCAGIADYLDVPVKLVRILVVLSIFFGLAFFTVVAYIVLSFVLDPMPDNLAAGKPQPTSG
ELLDTVDRELAAGEKRLREMERYVTSDTFTLRSRFRQL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=119, Percent_Identity=84.0336134453782, Blast_Score=209, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 13364; Mature: 13233

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGINLNKKLWRMPQKGMVRGVCAGIADYLDVPVKLVRILVVLSIFFGLAFFTVVAYIVL
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFVLDPMPDNLAAGKPQPTSGELLDTVDRELAAGEKRLREMERYVTSDTFTLRSRFRQL
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GGINLNKKLWRMPQKGMVRGVCAGIADYLDVPVKLVRILVVLSIFFGLAFFTVVAYIVL
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFVLDPMPDNLAAGKPQPTSGELLDTVDRELAAGEKRLREMERYVTSDTFTLRSRFRQL
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]