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The map label for this gene is ygdH [C]

Identifier: 194334648

GI number: 194334648

Start: 2021613

End: 2022350

Strand: Reverse

Name: ygdH [C]

Synonym: Paes_1849

Alternate gene names: 194334648

Gene position: 2022350-2021613 (Counterclockwise)

Preceding gene: 194334649

Following gene: 194334646

Centisome position: 80.48

GC content: 50.27

Gene sequence:

>738_bases
ATGCCTTCGTCGGATAAAAGCACTAAACGTCAGGACGTTCAGCCTGTGCCGGTTCATCCGCCGGACCAGCGTTTTGCCAG
GCAGACAGATTTTTCGGGTGATGGCTGGAGAGTGTTCAAAATTATGGCCGAATTCGTCAACGGATTCGAAAAAATGTCAG
AAATAGGCCCGGCGGTCAGTGTCTTCGGTTCGACCAGGGTCGTGCAGGGAGACCGGGAGTACGCTCTGGCCGAGGAGATG
GGGCGGCTTCTTGCAGCTCATGGCTTTGCAGCTATCACAGGAGGCGGTCCCGGAGTGATGGAGGCGGCAAATAAAGGGGC
ACAGCAGGCAGGAGGTCATTCAATCGGTTTTAATATCAAACTGCCGAACCAGCAGAAGTCGAACCCGTTTATTGATCGCG
ACAAACTGGTGACCTTTGACTATTTTTTTGTGCGCAAGGTTATGTTTCTCAAGTATTCGCAGGCGTTTGTCGTGCTGCCT
GGAGGGTTCGGCACCATGGATGAGTTTTTTGAAGCCGTAACGTTGATCCAGACCCGCAAAAGCGCGCGGTTTCCTGTTAT
TCTGATGGGGGGTTCCTACTGGGACGGTTTTTACCGTTGGATGCATGATACCATGTGTCATCAAAAGGGCTACATTGGCC
AGGAAGATCTTGACTTTATCTTTCTTGAGGATGATCCAGGGAAGGTCATAGATATTATCCTGGGATTTTATCCCGAAGGA
TATTGCTTGAATTTTTAG

Upstream 100 bases:

>100_bases
TATGGTGTGCAGTTCCATCCCGAATCAATCATGACCCATGAAGGAAAGAGTATCATCCGGAATTTTCTGGACCTTTCCGG
TCATACAAACGAGTAGAGCC

Downstream 100 bases:

>100_bases
TTCTGATCATGTTGCTGTTCTCCTTCTATCCACATCAGGATGGCCTGGCGCTGGGTTGTTGTCAGTGCTCTTTCCGGGTA
GAGCATCCGAAAGTTTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPSSDKSTKRQDVQPVPVHPPDQRFARQTDFSGDGWRVFKIMAEFVNGFEKMSEIGPAVSVFGSTRVVQGDREYALAEEM
GRLLAAHGFAAITGGGPGVMEAANKGAQQAGGHSIGFNIKLPNQQKSNPFIDRDKLVTFDYFFVRKVMFLKYSQAFVVLP
GGFGTMDEFFEAVTLIQTRKSARFPVILMGGSYWDGFYRWMHDTMCHQKGYIGQEDLDFIFLEDDPGKVIDIILGFYPEG
YCLNF

Sequences:

>Translated_245_residues
MPSSDKSTKRQDVQPVPVHPPDQRFARQTDFSGDGWRVFKIMAEFVNGFEKMSEIGPAVSVFGSTRVVQGDREYALAEEM
GRLLAAHGFAAITGGGPGVMEAANKGAQQAGGHSIGFNIKLPNQQKSNPFIDRDKLVTFDYFFVRKVMFLKYSQAFVVLP
GGFGTMDEFFEAVTLIQTRKSARFPVILMGGSYWDGFYRWMHDTMCHQKGYIGQEDLDFIFLEDDPGKVIDIILGFYPEG
YCLNF
>Mature_244_residues
PSSDKSTKRQDVQPVPVHPPDQRFARQTDFSGDGWRVFKIMAEFVNGFEKMSEIGPAVSVFGSTRVVQGDREYALAEEMG
RLLAAHGFAAITGGGPGVMEAANKGAQQAGGHSIGFNIKLPNQQKSNPFIDRDKLVTFDYFFVRKVMFLKYSQAFVVLPG
GFGTMDEFFEAVTLIQTRKSARFPVILMGGSYWDGFYRWMHDTMCHQKGYIGQEDLDFIFLEDDPGKVIDIILGFYPEGY
CLNF

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27490; Mature: 27358

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSDKSTKRQDVQPVPVHPPDQRFARQTDFSGDGWRVFKIMAEFVNGFEKMSEIGPAVS
CCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
VFGSTRVVQGDREYALAEEMGRLLAAHGFAAITGGGPGVMEAANKGAQQAGGHSIGFNIK
HCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCHHHCCCCEEEEEEE
LPNQQKSNPFIDRDKLVTFDYFFVRKVMFLKYSQAFVVLPGGFGTMDEFFEAVTLIQTRK
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHC
SARFPVILMGGSYWDGFYRWMHDTMCHQKGYIGQEDLDFIFLEDDPGKVIDIILGFYPEG
CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEHHHHHCCCCC
YCLNF
EEECC
>Mature Secondary Structure 
PSSDKSTKRQDVQPVPVHPPDQRFARQTDFSGDGWRVFKIMAEFVNGFEKMSEIGPAVS
CCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
VFGSTRVVQGDREYALAEEMGRLLAAHGFAAITGGGPGVMEAANKGAQQAGGHSIGFNIK
HCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCHHHCCCCEEEEEEE
LPNQQKSNPFIDRDKLVTFDYFFVRKVMFLKYSQAFVVLPGGFGTMDEFFEAVTLIQTRK
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHC
SARFPVILMGGSYWDGFYRWMHDTMCHQKGYIGQEDLDFIFLEDDPGKVIDIILGFYPEG
CCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEHHHHHCCCCC
YCLNF
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA