Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333488
Identifier: 194333488
GI number: 194333488
Start: 687788
End: 688273
Strand: Reverse
Name: 194333488
Synonym: Paes_0650
Alternate gene names: NA
Gene position: 688273-687788 (Counterclockwise)
Preceding gene: 194333490
Following gene: 194333487
Centisome position: 27.39
GC content: 50.82
Gene sequence:
>486_bases ATGGGCTATTCACATGCAGTAAGGCAAAGTGTTCTGAAGAAAGTGCTGCCGCCGGAAGGCCGGAGCATCAGTGAAGTGAG CCGGGAAACCGGCGTGAACGAGCAAACCATCCGGAATTGGATCAAACGAAGTAAAACGGGTATCTTGGCTGATGGCAATC AAGACAGCTGTCCCCGTTTCCTGACACCCAAAGAGAAGTACCAACTGGTTGTTGAGGCCGCCGGTATCGATGATGAGCAA CTGGGCGGGTTTCTCAGGGAACGCGGGCTGCATTCAGAACATATCACCATCTGGGACCAGGAGCTTCGGGACATGATCGA CAACAAAAACGACCAGCAAGACAAAGAGAATAAAGCACTTAAGAAAAAGGTCAAAGAGCTTGAGAAGGAGCTGCAGCGCA AGGAAAAAGCGCTTGCCGAAGCAGCGGCTCTGTTAGTGTTAAAAAAAAAGTTAGATGCCCTTACGAGGGAGCACGAGGAC GACTGA
Upstream 100 bases:
>100_bases GGCACAGCTGACGGTACAGCTGGTTCCGAAAAGAACATTGCAATCACGCGACTTTGCACGTCGCACAATATAGATGTCGT ATCCACAAAGGAGGCGACCA
Downstream 100 bases:
>100_bases TCCTTGAGGATCACAAGACTGAAGTCATTATGCTGATAGAAGAAGCACATGAAAACGGAGCACGCTACAGCAAGGCCTGT GAGGTTGTCGGGATCTCTAA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MGYSHAVRQSVLKKVLPPEGRSISEVSRETGVNEQTIRNWIKRSKTGILADGNQDSCPRFLTPKEKYQLVVEAAGIDDEQ LGGFLRERGLHSEHITIWDQELRDMIDNKNDQQDKENKALKKKVKELEKELQRKEKALAEAAALLVLKKKLDALTREHED D
Sequences:
>Translated_161_residues MGYSHAVRQSVLKKVLPPEGRSISEVSRETGVNEQTIRNWIKRSKTGILADGNQDSCPRFLTPKEKYQLVVEAAGIDDEQ LGGFLRERGLHSEHITIWDQELRDMIDNKNDQQDKENKALKKKVKELEKELQRKEKALAEAAALLVLKKKLDALTREHED D >Mature_160_residues GYSHAVRQSVLKKVLPPEGRSISEVSRETGVNEQTIRNWIKRSKTGILADGNQDSCPRFLTPKEKYQLVVEAAGIDDEQL GGFLRERGLHSEHITIWDQELRDMIDNKNDQQDKENKALKKKVKELEKELQRKEKALAEAAALLVLKKKLDALTREHEDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18443; Mature: 18312
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYSHAVRQSVLKKVLPPEGRSISEVSRETGVNEQTIRNWIKRSKTGILADGNQDSCPRF CCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCCCCCC LTPKEKYQLVVEAAGIDDEQLGGFLRERGLHSEHITIWDQELRDMIDNKNDQQDKENKAL CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH KKKVKELEKELQRKEKALAEAAALLVLKKKLDALTREHEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GYSHAVRQSVLKKVLPPEGRSISEVSRETGVNEQTIRNWIKRSKTGILADGNQDSCPRF CHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCCCCCC LTPKEKYQLVVEAAGIDDEQLGGFLRERGLHSEHITIWDQELRDMIDNKNDQQDKENKAL CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH KKKVKELEKELQRKEKALAEAAALLVLKKKLDALTREHEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA