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The map label for this gene is nisX1 [H]

Identifier: 194333487

GI number: 194333487

Start: 686775

End: 687758

Strand: Reverse

Name: nisX1 [H]

Synonym: Paes_0649

Alternate gene names: 194333487

Gene position: 687758-686775 (Counterclockwise)

Preceding gene: 194333488

Following gene: 194333486

Centisome position: 27.37

GC content: 53.66

Gene sequence:

>984_bases
ATGCTGATAGAAGAAGCACATGAAAACGGAGCACGCTACAGCAAGGCCTGTGAGGTTGTCGGGATCTCTAACCGAACCCT
GCAGCGCTGGAAAAGCGGTTGCCTGAACGACCGGCGAAAAGGCTCAAAGAAAACCGTTCCGAGAAAAGTGCCCCAGGAAA
TCAGGGAAGAGATCGTCGCAGTCTGCAATGAACAGCGATTCCGGGATCAGACGCCGTATGAAATCGTCCCGCAACTCCTG
ACAGAAGGCCGGTATCTGGCCTCTGAAAGCACGATCTACCGTATCCTGAGGGAGAGGGACCTGCTGCACCATAGGAGCGA
ACTGCGCGTACGCCATCGCCACTCCCAGCCGCCGGAACGACGGGCGACAGGGTCGGATCAGGTGTACACGTGGGACATCA
CCTACATGGGCCGTACGATAAGAGGACTATTGTATTACGCATACGTCGTAACGGACATCTTTGACAAATCCATCGTTGGC
TGGGCCGTGCATGCAGAAGAGAGCGAAACACACAGCCGGGCGCTGTTCGAGCGGATCCTGAAAGGGCGTCGAATAAGCCT
GAAAGCGCTGCATGCCGATAACGGCCATCCGATGAAAGGGGTGACGCTGATGGCGCTCCTGAAAGACCTGAAAGTAGCAG
TCTCGCACAGCAGGCCACGGACCAGTAATGACAACCCGTATATCGAATCGCTGTTCAAGACGATGAAGTACCATGTCACG
TATCCGAAAGCATTTGAAACACTGGAAGATGCAAGGCAATGGATGGGAGCGTTCGTCAACTGGTACAACACCGAACACCT
GCATTCTTCAATTGGCTACGTGACACCGCATCAAATGCGATACGGACAGGCAGAAGCGATTTTCGAACAGCGAAATGATG
CGATAAATCGCGCCAGAGAGTTACATCCTGAACGCTGGGGTTCACGACCAGCAAAGCAATGGATTGTTAACCGGGAAGTG
GTGCTCAACCCGGACAAAAAGTGA

Upstream 100 bases:

>100_bases
CCGAAGCAGCGGCTCTGTTAGTGTTAAAAAAAAAGTTAGATGCCCTTACGAGGGAGCACGAGGACGACTGATCCTTGAGG
ATCACAAGACTGAAGTCATT

Downstream 100 bases:

>100_bases
ATGAATTTTTTTAAAAAAATGCGCCATCTGTGTTGACATAAAGCGCAGGGCTTAGAAACATCAGCAATTAATAGTCCATT
TTTTAATGTGTTTTTAGCTG

Product: Integrase catalytic domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MLIEEAHENGARYSKACEVVGISNRTLQRWKSGCLNDRRKGSKKTVPRKVPQEIREEIVAVCNEQRFRDQTPYEIVPQLL
TEGRYLASESTIYRILRERDLLHHRSELRVRHRHSQPPERRATGSDQVYTWDITYMGRTIRGLLYYAYVVTDIFDKSIVG
WAVHAEESETHSRALFERILKGRRISLKALHADNGHPMKGVTLMALLKDLKVAVSHSRPRTSNDNPYIESLFKTMKYHVT
YPKAFETLEDARQWMGAFVNWYNTEHLHSSIGYVTPHQMRYGQAEAIFEQRNDAINRARELHPERWGSRPAKQWIVNREV
VLNPDKK

Sequences:

>Translated_327_residues
MLIEEAHENGARYSKACEVVGISNRTLQRWKSGCLNDRRKGSKKTVPRKVPQEIREEIVAVCNEQRFRDQTPYEIVPQLL
TEGRYLASESTIYRILRERDLLHHRSELRVRHRHSQPPERRATGSDQVYTWDITYMGRTIRGLLYYAYVVTDIFDKSIVG
WAVHAEESETHSRALFERILKGRRISLKALHADNGHPMKGVTLMALLKDLKVAVSHSRPRTSNDNPYIESLFKTMKYHVT
YPKAFETLEDARQWMGAFVNWYNTEHLHSSIGYVTPHQMRYGQAEAIFEQRNDAINRARELHPERWGSRPAKQWIVNREV
VLNPDKK
>Mature_327_residues
MLIEEAHENGARYSKACEVVGISNRTLQRWKSGCLNDRRKGSKKTVPRKVPQEIREEIVAVCNEQRFRDQTPYEIVPQLL
TEGRYLASESTIYRILRERDLLHHRSELRVRHRHSQPPERRATGSDQVYTWDITYMGRTIRGLLYYAYVVTDIFDKSIVG
WAVHAEESETHSRALFERILKGRRISLKALHADNGHPMKGVTLMALLKDLKVAVSHSRPRTSNDNPYIESLFKTMKYHVT
YPKAFETLEDARQWMGAFVNWYNTEHLHSSIGYVTPHQMRYGQAEAIFEQRNDAINRARELHPERWGSRPAKQWIVNREV
VLNPDKK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 38306; Mature: 38306

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEEAHENGARYSKACEVVGISNRTLQRWKSGCLNDRRKGSKKTVPRKVPQEIREEIVA
CCCCHHHHCCCHHHHHHHEECCCHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHH
VCNEQRFRDQTPYEIVPQLLTEGRYLASESTIYRILRERDLLHHRSELRVRHRHSQPPER
HHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
RATGSDQVYTWDITYMGRTIRGLLYYAYVVTDIFDKSIVGWAVHAEESETHSRALFERIL
HCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
KGRRISLKALHADNGHPMKGVTLMALLKDLKVAVSHSRPRTSNDNPYIESLFKTMKYHVT
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
YPKAFETLEDARQWMGAFVNWYNTEHLHSSIGYVTPHQMRYGQAEAIFEQRNDAINRARE
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHH
LHPERWGSRPAKQWIVNREVVLNPDKK
CCHHHHCCCHHHHHHCCCCEEECCCCC
>Mature Secondary Structure
MLIEEAHENGARYSKACEVVGISNRTLQRWKSGCLNDRRKGSKKTVPRKVPQEIREEIVA
CCCCHHHHCCCHHHHHHHEECCCHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHH
VCNEQRFRDQTPYEIVPQLLTEGRYLASESTIYRILRERDLLHHRSELRVRHRHSQPPER
HHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
RATGSDQVYTWDITYMGRTIRGLLYYAYVVTDIFDKSIVGWAVHAEESETHSRALFERIL
HCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH
KGRRISLKALHADNGHPMKGVTLMALLKDLKVAVSHSRPRTSNDNPYIESLFKTMKYHVT
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
YPKAFETLEDARQWMGAFVNWYNTEHLHSSIGYVTPHQMRYGQAEAIFEQRNDAINRARE
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHH
LHPERWGSRPAKQWIVNREVVLNPDKK
CCHHHHCCCHHHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]