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The map label for this gene is yrbH [C]

Identifier: 194333248

GI number: 194333248

Start: 440812

End: 441783

Strand: Reverse

Name: yrbH [C]

Synonym: Paes_0404

Alternate gene names: 194333248

Gene position: 441783-440812 (Counterclockwise)

Preceding gene: 194333251

Following gene: 194333245

Centisome position: 17.58

GC content: 51.85

Gene sequence:

>972_bases
ATGTCATCAGCTCAATCCATCATCTCTTCAGCCAAAACCATTCTGCGGCAAGAAGCCGCAGCAATCGAAAACATAGCAGG
ACTGCTTCGAGAAAGTTTTGCCGATGCGGTTTTCTCAATGTATAACTGCAAAGGAAAAGTCATTGTTTCCGGCATGGGCA
AATCAGGTATTATCGGACAGAAAATTGCCGCCACGCTCGCATCAACAGGAACGACAGCGCTTTTCATGCACCCTGCAGAC
GCTGCACACGGAGACCTTGGCGTTGTCAACAGCGGCGATATCGTCATCTGCCTCTCGAAAAGCGGTCTGACCGAAGAACT
GAACTTTATCCTCCCGGCCCTTCACCATAGAGGCGTCACCATTATCGCAATAGTCGGCAACCCCCGCTCATTTCTTGCTG
AAAAAGCCAATATCGTTCTCGATGTCAGTGTCTGTCAGGAAGCCTGCCCTTTTGACCTCGCCCCTACGACCTCGACAACA
GCAATGCTGGCGATGGGCGATGCGCTGGCAATCTCACTGATGAGGGAAAAACAGTTTACACCGAACGACTTCGCACTGAC
CCATCCAAAAGGATCTCTGGGAAAGCAGCTGACCATGAAGGTTGCTGACCTGATGACATCCGGCAAAGCGGTCCCGCTGG
TCACTGAGGAAGCCTCAGTGACAGATATGATCCTCGAAATGACATCAAAACGGTTCGGAGTCAGCGGTGTTACGAACAGG
GATGGTAAACTCAGCGGGATTTTCACCGATGGCGACCTCAGACGCCTCATCCAGAGAGGGGTAGACTTCAGTTCACTTTC
AGCCCTCGATGTCATGTCTCCGTCCCCCAAAACCGTCAGTGCCAACGCCCTTGCAAAAACCAGCCTCGAAATGCTCGAAA
CATATCGCATCACCCAGCTCATGGTCTGCGATAACGACGAAAGACCGGTCGGCATCATTCACATTCACGACCTCGTCACA
CAAGGACTGTAG

Upstream 100 bases:

>100_bases
AGACAGACAAACCAAAGGAATCGGCTCTGTTGTTGTAAAATATTAATATTTCACTGTTTTTTAAATAATTCAGCCTGATC
CGCCCACTTATTGAACGCAT

Downstream 100 bases:

>100_bases
GATAATTGGTGACTGGTGATTAGTGAATGGTAACTGGTCACGAATCAGATGCTTTCTTCAATTCGTGCAAATTCGTGTCA
ATTCGTGGACTGGAATACGT

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSSAQSIISSAKTILRQEAAAIENIAGLLRESFADAVFSMYNCKGKVIVSGMGKSGIIGQKIAATLASTGTTALFMHPAD
AAHGDLGVVNSGDIVICLSKSGLTEELNFILPALHHRGVTIIAIVGNPRSFLAEKANIVLDVSVCQEACPFDLAPTTSTT
AMLAMGDALAISLMREKQFTPNDFALTHPKGSLGKQLTMKVADLMTSGKAVPLVTEEASVTDMILEMTSKRFGVSGVTNR
DGKLSGIFTDGDLRRLIQRGVDFSSLSALDVMSPSPKTVSANALAKTSLEMLETYRITQLMVCDNDERPVGIIHIHDLVT
QGL

Sequences:

>Translated_323_residues
MSSAQSIISSAKTILRQEAAAIENIAGLLRESFADAVFSMYNCKGKVIVSGMGKSGIIGQKIAATLASTGTTALFMHPAD
AAHGDLGVVNSGDIVICLSKSGLTEELNFILPALHHRGVTIIAIVGNPRSFLAEKANIVLDVSVCQEACPFDLAPTTSTT
AMLAMGDALAISLMREKQFTPNDFALTHPKGSLGKQLTMKVADLMTSGKAVPLVTEEASVTDMILEMTSKRFGVSGVTNR
DGKLSGIFTDGDLRRLIQRGVDFSSLSALDVMSPSPKTVSANALAKTSLEMLETYRITQLMVCDNDERPVGIIHIHDLVT
QGL
>Mature_322_residues
SSAQSIISSAKTILRQEAAAIENIAGLLRESFADAVFSMYNCKGKVIVSGMGKSGIIGQKIAATLASTGTTALFMHPADA
AHGDLGVVNSGDIVICLSKSGLTEELNFILPALHHRGVTIIAIVGNPRSFLAEKANIVLDVSVCQEACPFDLAPTTSTTA
MLAMGDALAISLMREKQFTPNDFALTHPKGSLGKQLTMKVADLMTSGKAVPLVTEEASVTDMILEMTSKRFGVSGVTNRD
GKLSGIFTDGDLRRLIQRGVDFSSLSALDVMSPSPKTVSANALAKTSLEMLETYRITQLMVCDNDERPVGIIHIHDLVTQ
GL

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=315, Percent_Identity=44.7619047619048, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI87082151, Length=320, Percent_Identity=39.6875, Blast_Score=233, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34198; Mature: 34067

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAQSIISSAKTILRQEAAAIENIAGLLRESFADAVFSMYNCKGKVIVSGMGKSGIIGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH
KIAATLASTGTTALFMHPADAAHGDLGVVNSGDIVICLSKSGLTEELNFILPALHHRGVT
HHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCEE
IIAIVGNPRSFLAEKANIVLDVSVCQEACPFDLAPTTSTTAMLAMGDALAISLMREKQFT
EEEEECCCHHHHHHHCCEEEEHHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHHHCCCC
PNDFALTHPKGSLGKQLTMKVADLMTSGKAVPLVTEEASVTDMILEMTSKRFGVSGVTNR
CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCC
DGKLSGIFTDGDLRRLIQRGVDFSSLSALDVMSPSPKTVSANALAKTSLEMLETYRITQL
CCEEEEEEECHHHHHHHHHCCCHHHCCHHHCCCCCCCEEECHHHHHHHHHHHHHHHHEEE
MVCDNDERPVGIIHIHDLVTQGL
EEECCCCCCEEEEEEHHHHHHCC
>Mature Secondary Structure 
SSAQSIISSAKTILRQEAAAIENIAGLLRESFADAVFSMYNCKGKVIVSGMGKSGIIGQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH
KIAATLASTGTTALFMHPADAAHGDLGVVNSGDIVICLSKSGLTEELNFILPALHHRGVT
HHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCEE
IIAIVGNPRSFLAEKANIVLDVSVCQEACPFDLAPTTSTTAMLAMGDALAISLMREKQFT
EEEEECCCHHHHHHHCCEEEEHHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHHHCCCC
PNDFALTHPKGSLGKQLTMKVADLMTSGKAVPLVTEEASVTDMILEMTSKRFGVSGVTNR
CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCC
DGKLSGIFTDGDLRRLIQRGVDFSSLSALDVMSPSPKTVSANALAKTSLEMLETYRITQL
CCEEEEEEECHHHHHHHHHCCCHHHCCHHHCCCCCCCEEECHHHHHHHHHHHHHHHHEEE
MVCDNDERPVGIIHIHDLVTQGL
EEECCCCCCEEEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]