Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333251
Identifier: 194333251
GI number: 194333251
Start: 443890
End: 444444
Strand: Reverse
Name: 194333251
Synonym: Paes_0407
Alternate gene names: NA
Gene position: 444444-443890 (Counterclockwise)
Preceding gene: 194333252
Following gene: 194333248
Centisome position: 17.69
GC content: 45.05
Gene sequence:
>555_bases ATGGATTTCCTCTCGTCGAAACGATTTGTATCAGTTATCCTTACCGCTCTGCTCCTGCTCAATATTGCATTACTCGGAGC ACTATGGTGGCAGAATTTTTATACGCCGGCAAACCATCCCGTTGAAGCAGACAAAAAAAATTATACCAGCAAGCGCTCTT TTTTTCAGAAAGAGCTCAACCTGACTGATGATCAGAGCAGAAAATTCAATGCCTTGAGAAAGGATCATTTCAATGGATCG ATCCCGGTCTTCATTCAAATTGCCGCTCTCAAAAAACAGTTGATCCGCGAATCAGTCAGGGAAAAACCGGATGTCGAGAT CATCAACGATCTATCCGACAGGATCGGGCGACACCAGGCGATTCTCGAACGACGCCTCGCGTGGCACTTTCACAGTCTGT CACTGGTATGCACACCTGAACAGCGAGACTCGCTTCAGAAGATGCTTGAAAACGTCACGTTTAAAGCAAGAATAAAAAGC AGGACAATAGTGCGGAAAGATATGAACGTCAACGAGAAAACTCCAGATTCTCTCATGCAATCGCAACAACAGTAA
Upstream 100 bases:
>100_bases ATCTTGCTCTGGCAGCACTGCTCTGGCGACCCTTCACAACCCGGTGGGCAGCACACAGACTGAAATCGCCGGAATCATTT ATTAAGTAAAGAACACAGAG
Downstream 100 bases:
>100_bases CACAGCAGCGCACGTTCTAATGGCACTGAAGAACCTGATTCTGTTACACTTCGTTCTCTGTCTCGCTCCAGCCGGAAAAG AAAACAACAGGCACAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MDFLSSKRFVSVILTALLLLNIALLGALWWQNFYTPANHPVEADKKNYTSKRSFFQKELNLTDDQSRKFNALRKDHFNGS IPVFIQIAALKKQLIRESVREKPDVEIINDLSDRIGRHQAILERRLAWHFHSLSLVCTPEQRDSLQKMLENVTFKARIKS RTIVRKDMNVNEKTPDSLMQSQQQ
Sequences:
>Translated_184_residues MDFLSSKRFVSVILTALLLLNIALLGALWWQNFYTPANHPVEADKKNYTSKRSFFQKELNLTDDQSRKFNALRKDHFNGS IPVFIQIAALKKQLIRESVREKPDVEIINDLSDRIGRHQAILERRLAWHFHSLSLVCTPEQRDSLQKMLENVTFKARIKS RTIVRKDMNVNEKTPDSLMQSQQQ >Mature_184_residues MDFLSSKRFVSVILTALLLLNIALLGALWWQNFYTPANHPVEADKKNYTSKRSFFQKELNLTDDQSRKFNALRKDHFNGS IPVFIQIAALKKQLIRESVREKPDVEIINDLSDRIGRHQAILERRLAWHFHSLSLVCTPEQRDSLQKMLENVTFKARIKS RTIVRKDMNVNEKTPDSLMQSQQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21508; Mature: 21508
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFLSSKRFVSVILTALLLLNIALLGALWWQNFYTPANHPVEADKKNYTSKRSFFQKELN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC LTDDQSRKFNALRKDHFNGSIPVFIQIAALKKQLIRESVREKPDVEIINDLSDRIGRHQA CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ILERRLAWHFHSLSLVCTPEQRDSLQKMLENVTFKARIKSRTIVRKDMNVNEKTPDSLMQ HHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH SQQQ CCCC >Mature Secondary Structure MDFLSSKRFVSVILTALLLLNIALLGALWWQNFYTPANHPVEADKKNYTSKRSFFQKELN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC LTDDQSRKFNALRKDHFNGSIPVFIQIAALKKQLIRESVREKPDVEIINDLSDRIGRHQA CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ILERRLAWHFHSLSLVCTPEQRDSLQKMLENVTFKARIKSRTIVRKDMNVNEKTPDSLMQ HHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH SQQQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA