Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is yaeT [H]
Identifier: 194333244
GI number: 194333244
Start: 434216
End: 436699
Strand: Reverse
Name: yaeT [H]
Synonym: Paes_0400
Alternate gene names: 194333244
Gene position: 436699-434216 (Counterclockwise)
Preceding gene: 194333245
Following gene: 194333243
Centisome position: 17.38
GC content: 49.6
Gene sequence:
>2484_bases ATGTGTAATTCAATGAAACAACAGCGATCATTTCAGTCATTTCAGACCCTTCTGCTCCTGCTTTTCTTCACCATAACCAT GGTACCGGGAAATCTTTATGCACAGCAGAGACAGAACACCAGACCCGCCCCGACCTACAGGGTTGCTGATATCTCGTTTG AAGGCCTTCAGTCGATGAGCACAGAAGAACTGACCAAAAGTCTGCCGCTGAAACGAGGCGATAGCATATCAATCCCTGGA GCCGAAATTCCTCTTGCCATTCAGTATCTCTGGCAGCAGAACATTTTCAGCGACATTCAGGTCAAACAGAAGATGCAACC CGCCAACTCGGTCGCTCTGACCTTTGTCGTTATTGAGCTACCCGTCCTTGACCAGGTCATATTCAAAGGAAACGAAAAGT TTGACGCCAAAAAGCTACAGGGAATCGCTGCGCTGAAAACCGGACGTCAGCTCAATGAGCAGAGCCTTATCACAGCAAAA AACGCCATCACCAAAGCCTATGAAGATAAGGGGTATTCGAGAGCCCGCGTATCGTATGAAATCAAAAAGCTTTCAGGCAA TCAGGTCGCAGCACTCTTCGAAATCGACGAGAATGAGAAAGTCGTTATCGAAAAGATCCGTTTTCACGGCAACAACGCGT TCAGTGACGGCAAACTAAGAGGGATCTTCAAGGAAACCAGCCAGAACTCGTGGTGGAAAAAAGTTTTCGGCGAACCAAAG CTCGACACAAGAGCCTTTGACGAAGACAAACAGCTCCTGGTGAATTTTTATCGCGACAACGGCTACCGTGACATTAAAAT CATCAGCGATTCTATCTCATATACTCAGAACAGGAAAGGTCTGCTGATCGATATTTATATCGAAGAAGGACCGGTCTACC ATATCAGAAATGTCACCTGGAACGGCAATACCAAGGATTTTGCCTCCACCGAAACTCTTAACTATGTCTTCGGGATCAAA AAGGGCGACATCTACGATGCAACAAAAATCCAGGAACGCCTCAACTTCTCCCAGAACAACCGTGACATCGGCTCGCTCTA TCTTGACAGGGGCTACCTCTCATTCCGATCAAGACTCGAAGAACAGGTCGTCCAGCCCGACTCGATCGATCTGAACATCT ATCTCAGAGAAGGCGAGCAGTTCAGACTGGGTAAAATCAATATCAAAGGCAACACCAAGACCAAAGATCAGATTATCCGC AGAGAACTCAGGACGGTACCCGGCGAAATGTTCAGCCGGAAAGATGTCGTCAGAAGCGTCAGGGAAATATCCATGCTGAA CTACTTCGCCCCCGAAGAGATCAGACCTGATATTGAACCGAATGAAAAAAACAATACCGTCGATATCACCTACAACGTGA CTGAACGCCAGACCGACACCTTCAACGCTTCGGTCGGCTACAGCGGCAATATAGGATTCACCGGAGCCCTTGGCGTCACC TTCAATAATTTCTCGCTCGAAGACCTCTTCAGTGGTGAATCGTGGGATCCCCTGCCTCATGGCGATGGCCAGCAGCTCGG ATTCCAGTGGCAGTTCGGCGATGAGGACTATCAGAATATTTCGCTGAACTTCACCGAACCATGGGCATTTGGAACCCCTA CCTCTGTAGGCTTCTCGGTCTTCAGCGTCAAGAGAAACTACGACATCTATGATGATGGAGAAGACACCAGTTCAAACAAC CTCATCAAGCAGTATGGCGCATCGCTCAATATCGGCAAACGCCTCTCCTGGCCGGACGACTACTTCTCGATCAACTGGAA GCTGAAATACCTGCATAGTGAAGGACAGCTATTAAGTTTTGTCGAGGCAGATGATCTTCCGGAAAAAGCAGACGAGTTCT CGATCACGCAGACCATTACGCGAAACAGTATCGATAATCCGATCTATCCACGACGAGGCAGTAAAAACTCCCTTTCCGCC CAGCTTGCCGGCGGCCCTCTCCCCGGCTCGGTTGATTTCTACAAGTTCATCGGCTCATCCAGCTGGTACTTTCATCTGGG TAACGATTTCGTGCTGAACGCCTCAACCCAGCACGGCTACCTCGGAACGTTCAGCGACGAGGACTACTTCCCTTACACAG AGTCGTTCTACATGGGCGGCAGCGGCCTGTCATCCCTGTCAACCGTTCCGTTGAGAGGCTACGACGACCGCTCAATAGGA GATCTTAATAACAACACTGACCTCTACACAGGCAGAGTCTACTCCAAGTTCACCACCGAGCTGCGCTATCCGCTCACGCT TTCACCTGCAGCAAGTGTTTTTGCTCTTGCATTTTTTGAAGCAGGCAACCTCTGGGAAGACCCGTCAGACTTCTCATACA GCGACCTGAAGAAGTCAGCAGGTATCGGCCTGAGGCTCTATCTGCCGATCATCGGCCTTGTAGGACTTGACTACGGCTAC GGTTTCGACTCCGTTGCAAGCAACCCGGACGCCGACAATCAGGGCTGGAACTTTATCTTCAGCTTCGGTCAGTTCGCCAA TTGA
Upstream 100 bases:
>100_bases AACTCTATGAAGCGATACGGGATTTCAGTGCGAGGGAAAGACGTTTTGGCCTCACCAGTGAACAACTCAAAGACAATAAA GCCCGGTAACAGTAACAACG
Downstream 100 bases:
>100_bases GCGGTACTTTCAGAGGAAAATTCACATTTTTTTGAATCGTTCTTGAAAATCTTGTATCTTAACGAAGAAAGCAAAGCGAA ATCCTGCTTTGCTATCTATC
Product: outer membrane protein assembly complex, YaeT protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MCNSMKQQRSFQSFQTLLLLLFFTITMVPGNLYAQQRQNTRPAPTYRVADISFEGLQSMSTEELTKSLPLKRGDSISIPG AEIPLAIQYLWQQNIFSDIQVKQKMQPANSVALTFVVIELPVLDQVIFKGNEKFDAKKLQGIAALKTGRQLNEQSLITAK NAITKAYEDKGYSRARVSYEIKKLSGNQVAALFEIDENEKVVIEKIRFHGNNAFSDGKLRGIFKETSQNSWWKKVFGEPK LDTRAFDEDKQLLVNFYRDNGYRDIKIISDSISYTQNRKGLLIDIYIEEGPVYHIRNVTWNGNTKDFASTETLNYVFGIK KGDIYDATKIQERLNFSQNNRDIGSLYLDRGYLSFRSRLEEQVVQPDSIDLNIYLREGEQFRLGKINIKGNTKTKDQIIR RELRTVPGEMFSRKDVVRSVREISMLNYFAPEEIRPDIEPNEKNNTVDITYNVTERQTDTFNASVGYSGNIGFTGALGVT FNNFSLEDLFSGESWDPLPHGDGQQLGFQWQFGDEDYQNISLNFTEPWAFGTPTSVGFSVFSVKRNYDIYDDGEDTSSNN LIKQYGASLNIGKRLSWPDDYFSINWKLKYLHSEGQLLSFVEADDLPEKADEFSITQTITRNSIDNPIYPRRGSKNSLSA QLAGGPLPGSVDFYKFIGSSSWYFHLGNDFVLNASTQHGYLGTFSDEDYFPYTESFYMGGSGLSSLSTVPLRGYDDRSIG DLNNNTDLYTGRVYSKFTTELRYPLTLSPAASVFALAFFEAGNLWEDPSDFSYSDLKKSAGIGLRLYLPIIGLVGLDYGY GFDSVASNPDADNQGWNFIFSFGQFAN
Sequences:
>Translated_827_residues MCNSMKQQRSFQSFQTLLLLLFFTITMVPGNLYAQQRQNTRPAPTYRVADISFEGLQSMSTEELTKSLPLKRGDSISIPG AEIPLAIQYLWQQNIFSDIQVKQKMQPANSVALTFVVIELPVLDQVIFKGNEKFDAKKLQGIAALKTGRQLNEQSLITAK NAITKAYEDKGYSRARVSYEIKKLSGNQVAALFEIDENEKVVIEKIRFHGNNAFSDGKLRGIFKETSQNSWWKKVFGEPK LDTRAFDEDKQLLVNFYRDNGYRDIKIISDSISYTQNRKGLLIDIYIEEGPVYHIRNVTWNGNTKDFASTETLNYVFGIK KGDIYDATKIQERLNFSQNNRDIGSLYLDRGYLSFRSRLEEQVVQPDSIDLNIYLREGEQFRLGKINIKGNTKTKDQIIR RELRTVPGEMFSRKDVVRSVREISMLNYFAPEEIRPDIEPNEKNNTVDITYNVTERQTDTFNASVGYSGNIGFTGALGVT FNNFSLEDLFSGESWDPLPHGDGQQLGFQWQFGDEDYQNISLNFTEPWAFGTPTSVGFSVFSVKRNYDIYDDGEDTSSNN LIKQYGASLNIGKRLSWPDDYFSINWKLKYLHSEGQLLSFVEADDLPEKADEFSITQTITRNSIDNPIYPRRGSKNSLSA QLAGGPLPGSVDFYKFIGSSSWYFHLGNDFVLNASTQHGYLGTFSDEDYFPYTESFYMGGSGLSSLSTVPLRGYDDRSIG DLNNNTDLYTGRVYSKFTTELRYPLTLSPAASVFALAFFEAGNLWEDPSDFSYSDLKKSAGIGLRLYLPIIGLVGLDYGY GFDSVASNPDADNQGWNFIFSFGQFAN >Mature_827_residues MCNSMKQQRSFQSFQTLLLLLFFTITMVPGNLYAQQRQNTRPAPTYRVADISFEGLQSMSTEELTKSLPLKRGDSISIPG AEIPLAIQYLWQQNIFSDIQVKQKMQPANSVALTFVVIELPVLDQVIFKGNEKFDAKKLQGIAALKTGRQLNEQSLITAK NAITKAYEDKGYSRARVSYEIKKLSGNQVAALFEIDENEKVVIEKIRFHGNNAFSDGKLRGIFKETSQNSWWKKVFGEPK LDTRAFDEDKQLLVNFYRDNGYRDIKIISDSISYTQNRKGLLIDIYIEEGPVYHIRNVTWNGNTKDFASTETLNYVFGIK KGDIYDATKIQERLNFSQNNRDIGSLYLDRGYLSFRSRLEEQVVQPDSIDLNIYLREGEQFRLGKINIKGNTKTKDQIIR RELRTVPGEMFSRKDVVRSVREISMLNYFAPEEIRPDIEPNEKNNTVDITYNVTERQTDTFNASVGYSGNIGFTGALGVT FNNFSLEDLFSGESWDPLPHGDGQQLGFQWQFGDEDYQNISLNFTEPWAFGTPTSVGFSVFSVKRNYDIYDDGEDTSSNN LIKQYGASLNIGKRLSWPDDYFSINWKLKYLHSEGQLLSFVEADDLPEKADEFSITQTITRNSIDNPIYPRRGSKNSLSA QLAGGPLPGSVDFYKFIGSSSWYFHLGNDFVLNASTQHGYLGTFSDEDYFPYTESFYMGGSGLSSLSTVPLRGYDDRSIG DLNNNTDLYTGRVYSKFTTELRYPLTLSPAASVFALAFFEAGNLWEDPSDFSYSDLKKSAGIGLRLYLPIIGLVGLDYGY GFDSVASNPDADNQGWNFIFSFGQFAN
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=818, Percent_Identity=24.6943765281174, Blast_Score=176, Evalue=5e-45,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 93791; Mature: 93791
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNSMKQQRSFQSFQTLLLLLFFTITMVPGNLYAQQRQNTRPAPTYRVADISFEGLQSMS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCHHHHHCCC TEELTKSLPLKRGDSISIPGAEIPLAIQYLWQQNIFSDIQVKQKMQPANSVALTFVVIEL HHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEH PVLDQVIFKGNEKFDAKKLQGIAALKTGRQLNEQSLITAKNAITKAYEDKGYSRARVSYE HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEE IKKLSGNQVAALFEIDENEKVVIEKIRFHGNNAFSDGKLRGIFKETSQNSWWKKVFGEPK EEECCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEHHCCCCCHHHHHCCCCC LDTRAFDEDKQLLVNFYRDNGYRDIKIISDSISYTQNRKGLLIDIYIEEGPVYHIRNVTW CCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEE NGNTKDFASTETLNYVFGIKKGDIYDATKIQERLNFSQNNRDIGSLYLDRGYLSFRSRLE CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHH EQVVQPDSIDLNIYLREGEQFRLGKINIKGNTKTKDQIIRRELRTVPGEMFSRKDVVRSV HHHCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH REISMLNYFAPEEIRPDIEPNEKNNTVDITYNVTERQTDTFNASVGYSGNIGFTGALGVT HHHHHHHCCCCHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCEEEEEEEE FNNFSLEDLFSGESWDPLPHGDGQQLGFQWQFGDEDYQNISLNFTEPWAFGTPTSVGFSV ECCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEE FSVKRNYDIYDDGEDTSSNNLIKQYGASLNIGKRLSWPDDYFSINWKLKYLHSEGQLLSF EEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEE VEADDLPEKADEFSITQTITRNSIDNPIYPRRGSKNSLSAQLAGGPLPGSVDFYKFIGSS ECCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCC SWYFHLGNDFVLNASTQHGYLGTFSDEDYFPYTESFYMGGSGLSSLSTVPLRGYDDRSIG CEEEECCCEEEEECCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC DLNNNTDLYTGRVYSKFTTELRYPLTLSPAASVFALAFFEAGNLWEDPSDFSYSDLKKSA CCCCCCCEEECHHHHHHHHHEECCEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHC GIGLRLYLPIIGLVGLDYGYGFDSVASNPDADNQGWNFIFSFGQFAN CCCEEEHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MCNSMKQQRSFQSFQTLLLLLFFTITMVPGNLYAQQRQNTRPAPTYRVADISFEGLQSMS CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCHHHHHCCC TEELTKSLPLKRGDSISIPGAEIPLAIQYLWQQNIFSDIQVKQKMQPANSVALTFVVIEL HHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEH PVLDQVIFKGNEKFDAKKLQGIAALKTGRQLNEQSLITAKNAITKAYEDKGYSRARVSYE HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEE IKKLSGNQVAALFEIDENEKVVIEKIRFHGNNAFSDGKLRGIFKETSQNSWWKKVFGEPK EEECCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEHHCCCCCHHHHHCCCCC LDTRAFDEDKQLLVNFYRDNGYRDIKIISDSISYTQNRKGLLIDIYIEEGPVYHIRNVTW CCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEE NGNTKDFASTETLNYVFGIKKGDIYDATKIQERLNFSQNNRDIGSLYLDRGYLSFRSRLE CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHH EQVVQPDSIDLNIYLREGEQFRLGKINIKGNTKTKDQIIRRELRTVPGEMFSRKDVVRSV HHHCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH REISMLNYFAPEEIRPDIEPNEKNNTVDITYNVTERQTDTFNASVGYSGNIGFTGALGVT HHHHHHHCCCCHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCEEEEEEEE FNNFSLEDLFSGESWDPLPHGDGQQLGFQWQFGDEDYQNISLNFTEPWAFGTPTSVGFSV ECCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEE FSVKRNYDIYDDGEDTSSNNLIKQYGASLNIGKRLSWPDDYFSINWKLKYLHSEGQLLSF EEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEE VEADDLPEKADEFSITQTITRNSIDNPIYPRRGSKNSLSAQLAGGPLPGSVDFYKFIGSS ECCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCC SWYFHLGNDFVLNASTQHGYLGTFSDEDYFPYTESFYMGGSGLSSLSTVPLRGYDDRSIG CEEEECCCEEEEECCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC DLNNNTDLYTGRVYSKFTTELRYPLTLSPAASVFALAFFEAGNLWEDPSDFSYSDLKKSA CCCCCCCEEECHHHHHHHHHEECCEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHC GIGLRLYLPIIGLVGLDYGYGFDSVASNPDADNQGWNFIFSFGQFAN CCCEEEHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA